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Table 2 List of cDNAs down-regulated during PDH infection with DHBV

From: Differential gene expression analysis of in vitro duck hepatitis B virus infected primary duck hepatocyte cultures

No. Name of the clone Abundance Ratio BLAST Result BLAST/
tBLASTx
Amplicon Size (bp) e-value GenBank Accession No.
1 R73 1.52 Ferritin, heavy polypeptide 1 (FTH1)-Gallus gallus BLAST 342 4.00E-143 JG662661
2 R90 1.41 Zinc finger CCCH-type, antiviral 1 (ZC3HAV1)-Gallus gallus tBLASTx 328 1.00E-14 JG662662
3 R130 1.39 T-complex 1-Taeniopygia guttata BLAST 400 6.00E-172 JG662663
4 R108 1.39 Y box binding protein 1-Gallus gallus BLAST 486 0 JG662664
5 R96 1.34 MYST/Esa1-associated factor 6-Taeniopygia guttata BLAST 646 1.00E-17 JG662665
6 R97 1.33 Similar to RGD-CAP-Gallus gallus BLAST 743 0 JG662666
7 R111 1.31 PREDICTED: Gallus gallus similar to Ankycorbin BLAST 646 0 JG662667
8 R134 1.3 No significant similarity found tBLASTx 490 - JG662668
9 R123 1.25 ATPase8, ATPase6 genes for F0-ATP synthase subunit 8, F0-ATP synthase subunit 6-Anas platyrhynchos BLAST 462 0 JG662669
10 R133 1.24 Versican-Gallus gallus BLAST 257 3.00E-98 JG662670
11 R103 1.22 Platelet-activating factor acetylhydrolase isoform Ib, alpha subunit 45kDa (PAFAH1B1)-Gallus gallus BLAST 508 4.00E-145 JG662671
12 R16 1.18 UPF0308 protein-Gallus gallus BLAST 593 0 JG662672
13 R100 1.17 TRAF interacting protein (TRAIP)-Gallus gallus BLAST 631 0 JG662673
14 R84 1.16 Acid alpha-glucosidase-Macaca mulatta tBLASTx 756 3.8 JG662674
15 R15 1.15 Microtubule-associated protein RP/EB family, member 1-Taeniopygia guttata BLAST 438 5.00E-168 JG662675
16 R126 1.15 Catechol-O-methyltransferase-Gallus gallus tBLASTx 395 1.00E-25 JG662676
17 R135 1.14 Chromosome 15 hypothetical ATG/GTP binding protein-Gallus gallus tBLASTx 239 0.048 JG662677
18 R143 1.13 Ankyrin repeat domain 17 (ANKRD17)-Gallus gallus BLAST 546 0 JG662678
19 R45 1.13 Splicing factor, arginine/serine-rich 18 (SFRS18)-Gallus gallus tBLASTx 476 1.00E-145 JG662679
20 R141 1.11 Cytochrome oxidase subunit I (COI)-Anas platyrhynchos BLAST 336 1.00E-152 JG662680
21 R10 1.11 Eukaryotic translation initiation factor 5 (EIF5)-Gallus gallus BLAST 735 0 JG662681
22 R129 1.11 Beta-actin-Anas platyrhynchos BLAST 664 0 JG662682
23 R106 1.1 Alpha enolase-Peking Duck BLAST 381 0 JG662683
24 R93 1.1 No significant similarity found tBLASTx 488 - JG662684
25 R139 1.1 Similar to KIAA1824 protein/WD repeat domain 22-Gallus gallus BLAST 279 7.00E-100 JG662685
26 R104 1.09 Caspase 3, apoptosis-related cysteine peptidase (CASP3)-Gallus gallus BLAST 792 0 JG662686
27 R95 1.09 Gallus gallus finished cDNA, clone ChEST757h13 tBLASTx 793 5.00E-19 JG662687
28 R79 1.07 Ral guanine nucleotide dissociation stimulator-like 1 (RGL1)-Gallus gallus BLAST 333 1.00E-132 JG662688
29 R105 1.06 Gallus gallus similar to MGC53471 protein BLAST 646 7.00E-89 JG662689
30 R128 1.05 Hydroxyacyl glutathione hydrolase-like,transcript variant 2-Taeniopygia guttata BLAST 382 4.00E-54 JG662690
31 R22 1.05 Proteasome (prosome, macropain) 26S subunit, ATPase,1 (PSMC1)-Gallus gallus BLAST 324 4.00E-133 JG662691
32 R99 1.04 Gallus gallus hypothetical protein BLAST 362 2.00E-86 JG662692
33 R2 1.04 Ribosomal protein L35a-Gallus gallus BLAST 90 3.00E-08 JG662693
34 R36 1.04 Gallus gallus finished cDNA, clone ChEST191i5 tBLASTx 414 0.025 JG662694
35 R124 1.02 Gallus gallus BAC clone CH261-189F16 from chromosome z BLAST 524 0 JG662695
36 R86 1.02 Transmembrane protein 30A-Taeniopygia guttata BLAST 220 4.00E-72 JG662696