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Table 2 List of cDNAs down-regulated during PDH infection with DHBV

From: Differential gene expression analysis of in vitro duck hepatitis B virus infected primary duck hepatocyte cultures

No.

Name of the clone

Abundance Ratio

BLAST Result

BLAST/

tBLASTx

Amplicon Size (bp)

e-value

GenBank Accession No.

1

R73

1.52

Ferritin, heavy polypeptide 1 (FTH1)-Gallus gallus

BLAST

342

4.00E-143

JG662661

2

R90

1.41

Zinc finger CCCH-type, antiviral 1 (ZC3HAV1)-Gallus gallus

tBLASTx

328

1.00E-14

JG662662

3

R130

1.39

T-complex 1-Taeniopygia guttata

BLAST

400

6.00E-172

JG662663

4

R108

1.39

Y box binding protein 1-Gallus gallus

BLAST

486

0

JG662664

5

R96

1.34

MYST/Esa1-associated factor 6-Taeniopygia guttata

BLAST

646

1.00E-17

JG662665

6

R97

1.33

Similar to RGD-CAP-Gallus gallus

BLAST

743

0

JG662666

7

R111

1.31

PREDICTED: Gallus gallus similar to Ankycorbin

BLAST

646

0

JG662667

8

R134

1.3

No significant similarity found

tBLASTx

490

-

JG662668

9

R123

1.25

ATPase8, ATPase6 genes for F0-ATP synthase subunit 8, F0-ATP synthase subunit 6-Anas platyrhynchos

BLAST

462

0

JG662669

10

R133

1.24

Versican-Gallus gallus

BLAST

257

3.00E-98

JG662670

11

R103

1.22

Platelet-activating factor acetylhydrolase isoform Ib, alpha subunit 45kDa (PAFAH1B1)-Gallus gallus

BLAST

508

4.00E-145

JG662671

12

R16

1.18

UPF0308 protein-Gallus gallus

BLAST

593

0

JG662672

13

R100

1.17

TRAF interacting protein (TRAIP)-Gallus gallus

BLAST

631

0

JG662673

14

R84

1.16

Acid alpha-glucosidase-Macaca mulatta

tBLASTx

756

3.8

JG662674

15

R15

1.15

Microtubule-associated protein RP/EB family, member 1-Taeniopygia guttata

BLAST

438

5.00E-168

JG662675

16

R126

1.15

Catechol-O-methyltransferase-Gallus gallus

tBLASTx

395

1.00E-25

JG662676

17

R135

1.14

Chromosome 15 hypothetical ATG/GTP binding protein-Gallus gallus

tBLASTx

239

0.048

JG662677

18

R143

1.13

Ankyrin repeat domain 17 (ANKRD17)-Gallus gallus

BLAST

546

0

JG662678

19

R45

1.13

Splicing factor, arginine/serine-rich 18 (SFRS18)-Gallus gallus

tBLASTx

476

1.00E-145

JG662679

20

R141

1.11

Cytochrome oxidase subunit I (COI)-Anas platyrhynchos

BLAST

336

1.00E-152

JG662680

21

R10

1.11

Eukaryotic translation initiation factor 5 (EIF5)-Gallus gallus

BLAST

735

0

JG662681

22

R129

1.11

Beta-actin-Anas platyrhynchos

BLAST

664

0

JG662682

23

R106

1.1

Alpha enolase-Peking Duck

BLAST

381

0

JG662683

24

R93

1.1

No significant similarity found

tBLASTx

488

-

JG662684

25

R139

1.1

Similar to KIAA1824 protein/WD repeat domain 22-Gallus gallus

BLAST

279

7.00E-100

JG662685

26

R104

1.09

Caspase 3, apoptosis-related cysteine peptidase (CASP3)-Gallus gallus

BLAST

792

0

JG662686

27

R95

1.09

Gallus gallus finished cDNA, clone ChEST757h13

tBLASTx

793

5.00E-19

JG662687

28

R79

1.07

Ral guanine nucleotide dissociation stimulator-like 1 (RGL1)-Gallus gallus

BLAST

333

1.00E-132

JG662688

29

R105

1.06

Gallus gallus similar to MGC53471 protein

BLAST

646

7.00E-89

JG662689

30

R128

1.05

Hydroxyacyl glutathione hydrolase-like,transcript variant 2-Taeniopygia guttata

BLAST

382

4.00E-54

JG662690

31

R22

1.05

Proteasome (prosome, macropain) 26S subunit, ATPase,1 (PSMC1)-Gallus gallus

BLAST

324

4.00E-133

JG662691

32

R99

1.04

Gallus gallus hypothetical protein

BLAST

362

2.00E-86

JG662692

33

R2

1.04

Ribosomal protein L35a-Gallus gallus

BLAST

90

3.00E-08

JG662693

34

R36

1.04

Gallus gallus finished cDNA, clone ChEST191i5

tBLASTx

414

0.025

JG662694

35

R124

1.02

Gallus gallus BAC clone CH261-189F16 from chromosome z

BLAST

524

0

JG662695

36

R86

1.02

Transmembrane protein 30A-Taeniopygia guttata

BLAST

220

4.00E-72

JG662696