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Table 1 Characteristics of genotyped norovirus-positive clinical samples

From: Novel norovirus recombinants and GII.4 sub-lineages associated with outbreaks between 2006 and 2010 in Belgium

Year

Sample Name

Outbreak code

Outbreak localisation

Date of first symptoms

Sequenced region

Genotyping result

2006

IPH55

HAI0016

Hainaut

22/12/2006

A

GII.4 2006b

 

IPH57

   

A+C

GII.4 2006b

 

IPH59

   

A

GII.4 2006b

2007

IPH472

-

Namur

10/04/2007

A+C

GII.4 2006a

 

IPH473

   

A+C

GII.4 2006a

 

IPH474

   

A+C

GII.4 2006a

 

IPH475

   

A+C

GII.4 2006a

 

IPH477

   

A+C

GII.4 2006a

2008

IPH2159

08VG06

Limburg

30/09/2008

A

GII.2

 

IPH2161

   

Junction

GII.2

 

IPH2162

   

Junction

GII.2

 

IPH2204

08VG01

Flemish Brabant

1/10/2008

Junction

GII.4 2008

 

IPH2206

   

Junction

GII.4 2008

 

IPH2252

VBR008

Flemish Brabant

30/09/2008

C

GI.4

 

IPH2255

   

Junction

GI.4

 

IPH2700

08VG07

East Flanders

14/11/2008

A+C

GII.4 2006b/GII.4 2007

 

IPH2839

OVL009

East Flanders

26/11/2008

Junction

A

GII.e/GII.4 2007

GII.4 2006b/--

 

IPH3007

ANT005

Antwerp

2/12/2008

A+C

GII.7

 

IPH3059

08VG08

Limburg

12/12/2008

A

GII.4 2006b

 

IPH3060

   

A+C

GII.4 2006b

 

IPH3064

   

A

GII.4 2006b

 

IPH3069

   

A+C

GII.e/GII.4 2007

2009

IPH143

09VG2

Limburg

6/02/2009

Junction

GII.e/GII.4 2007

 

IPH608

09VG3

Limburg

22/03/2009

Junction

GII.4 2006b

 

IPH2171

09VG4

Limburg

05/05/2009

A+C

GII.e/GII.3

 

IPH2172

   

Junction

GII.e/GII.3

 

IPH2174

   

A+C

GII.e/GII.3

 

IPH2175

   

Junction

GII.e/GII.3

 

IPH2176

   

A+C

GII.e/GII.3

 

IPH3075

ANT011

Antwerp

8/12/2009

A

GII.4 2010/--

2010

IPH159

10VG1

Limburg

27/01/2010

A

GII.4 2010/--

 

IPH161

   

A+C

GII.4 2010

 

IPH163

LIM001

Limburg

27/01/2010

Junction

GII.g/GII.1

 

IPH164

   

A+C

GII.g/GII.1

 

IPH165

10VG2

Limburg

1/02/2010

A+C

GII.4 2010/GII.4 2010b

 

IPH167

   

A

GI.7/--

 

IPH251

   

A+C

GII.4 2010/GII.4 2010b

 

IPH294

10VG3

Brussels

2/02/2010

A+C

GII.4 2010/GII.4 2010b

 

IPH296

   

A+C

GII.4 2010/GII.4 2010b

 

IPH297

   

A+C

GII.4 2010/GII.4 2010b

 

IPH298

   

A+C

GII.4 2010/GII.4 2010b

 

IPH301

   

A+C

GII.4 2010/GII.4 2010b

 

IPH310

10VG9

Antwerp

17/02/2010

C

--/GII.4 2010b

 

IPH312

   

A+C

GII.4 2010/GII.4 2010b

 

IPH314

   

A+C

GII.4 2010/GII.4 2010b

 

IPH317

10VG4

Antwerp

17/02/2010

A+C

GII.4 2010/GII.4 2010b

 

IPH505

10VG5

Antwerp

04/03/2010

A

GII.g/--

 

IPH506

10CF1

Namur

04/03/2010

A+C

GII.4 2010/GII.4 2010b

 

IPH671

   

A+C

GII.4 2010/GII.4 2010b

 

IPH748

LIM003

Limburg

05/04/2010

C

--/GII.13

 

IPH966

LIM005

Limburg

08/05/2010

A+C

GII.g/GII.1

 

IPH967

   

A+C

GII.g/GII.1

 

IPH968

   

A

GII.g/--

 

IPH1010

ANT003

Antwerp

8/05/2010

A+C

GII.4 2010

 

IPH1093

OVL005

East Flanders

19/05/2010

A

GII.7/--

 

IPH1143

ANT004

Antwerp

18/05/2010

A+C

GII.2

 

IPH1919

VBR006

Flemish Brabant

17/07/2010

A+C

GII.g/GII.1

 

IPH1936

   

A+C

GII.g/GII.1

 

IPH1920

LIM007

Limburg

17/07/2010

C

--/GII.1

 

IPH2020

LIM008

Limburg

27/07/2010

A+C

GII.g/GII.1

 

IPH2021

   

A+C

GII.g/GII.1

 

IPH2022

   

A+C

GII.g/GII.1

 

IPH2045

   

Junction

GII.g/GII.1

  1. A: partial polymerase gene; C: partial capsid gene; Junction: ORF1-ORF2 overlap