Isolation, identification and complete genome sequence analysis of a strain of foot-and-mouth disease virus serotype Asia1 from pigs in southwest of China

Yang, Xin; Zhou, Ying-shun; Wang, Hong-ning; Zhang, Yi; Wei, Kun; Wang, Ting

doi:10.1186/1743-422X-8-175

Virology Journal

Table 2 Reference FMDV strains selected from GenBank

From: Isolation, identification and complete genome sequence analysis of a strain of foot-and-mouth disease virus serotype Asia1 from pigs in southwest of China

Genbank Accession no.	Strain	Species of origin	Country and year of isolation	Genbank Accession no.	Strain	Species of origin	Country and year of isolation
FJ906802	WHN/CHA/06	porcine	China, 2006	EF187273	HB/CHA/05	bovine	China, 2005
EF149009	JS/CHA/05	bovine	China, 2005	EF187272	QH/CHA/05	bovine	China, 2005
AY593797	3kimron/61	bovine	Israel, 1963	EF185303	BJ/CHA/05	bovine	China, 2005
EF457988	AFG/03	bovine	Afghanistan, 2003	EU091347	MYA/06	bovine	China, 2006
DQ533483	ZB/CHA/58	bovine	China, 1958	EU667461	LAO/3/98	bovine	Laos, 1998
EF149010	HNK/CHA/05	bovine	Hong Kong, 2005	FJ785294	IND/147/04	bovine	India, 2004
NC004915	India/72	bovine	India, 1972	FJ785235	HKN/3/05	bovine	Hong Kong, 2005
AY687333	IND/321/01	bovine	India, 2001	FJ785259	NKR/2/07	bovine	South Korea,2007
AY390432	YNBS/58	bovine	China, 1958	FJ785283	VIT/8/06	bovine	Viet Nam, 2005
AY593795	PAK/1/54	bovine	Pakistan, 1954	FJ785284	VIT/1/06	bovine	Viet Nam, 2005
AY593800	LEB/83	?	Lebanon, 1983	DQ101238	India/04	bovine	India,2004
FJ785252	MOG/05	bovine	Mongolia, 2005	EU667460	Laos/96	bovine	Laos, 1996
FJ785240	HKN/8/05	bovine	Hong Kong, 2005	FJ785268	Pry/RUS/05	bovine	Russia,2005
FJ785229	CAM/5/97	bovine	Cambodia, 1997	FJ785267	Kha/RUS/05	bovine	Russia, 2005
FJ785290	VIT/4/06	water buffalo	Viet Nam, 2005	FJ785266	PAK/22/05	bovine	Pakistan, 2005
DQ101242	India/02	bovine	Afghanistan, 2001	FJ785228	CAM/9/80	?	Cambodia, 1980
FJ785227	AFG/3//01	bovine	Afghanistan, 2001	FJ785249	KRG/2/04	?	Kyrgyzstan, 2004
FJ785246	IRN/30/04	?	Iran, 2004	DQ121116	IND/80	?	India,1980
FJ785258	MYA/1/05	?	Myanmar,2005	DQ121117	India/81	?	India, 1981
FJ785277	UZB/2003	?	Uzbekistan, 2003	AF308157	O/TW/97	porcine	Taiwan, 2002
DQ121401	Russia/05	?	Russia, 2005	AY317098	O/HKN/02	?	Hong Kong, 2002
EF185304	GS/CHA/05	bovine	China, 2005	AY312589	O/SKR/02	porcine	South Korea,2002

^a Eleven completely sequenced FMDV strains are indicated in boldface.
^b Question mark (?) indicates that data is inadequate.
^cAll the reference strains, except O/TW/97, O/HKN/02, and O/SKR/02, are FMDV serotype Asia1.

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ISSN: 1743-422X

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