Table 1 Colombian DENV-1 isolates sequenced and analyzed in the present study
From: Phylogenetic history demonstrates two different lineages of dengue type 1 virus in Colombia
ISOLATE* | LOCALITY | ISOLATION YEAR | GENOTYPE/LINEAGE** | ACCESSION NUMBER |
|---|---|---|---|---|
DENV-1/CO/261_Atlantico/1978 | Atlántico | 1978 | V/1 | HM067643 |
DENV-1/CO/150_Choco/1979 | Chocó | 1979 | V/1 | HM067617 |
DENV-1/CO/263_Choco/1979 | Chocó | 1979 | V/1 | HM067644 |
DENV-1/CO/267_Valle/1983 | Valle | 1983 | I | HM067645 |
DENV-1/CO/188_Guaviare/1987 | Guaviare | 1987 | V/1 | HM067618 |
DENV-1/CO/191_SanAndres/1996 | San Andrés | 1996 | V/2 | HM067619 |
DENV-1/CO/192_Santander/1997 | Santander | 1997 | V/1 | HM067620 |
DENV-1/CO/255_Santander/1997 | Santander | 1997 | V/1 | HM067642 |
DENV-1/CO/589_Casanare/1997 | Casanare | 1997 | V/1 | HM067678 |
DENV-1/CO/98_SanAndres/1998 | San Andrés | 1998 | V/1 | HM067615 |
DENV-1/CO/196_Huila/1998 | Huila | 1998 | V/1 | HM067621 |
DENV-1/CO/197_Santander/1998 | Santander | 1998 | V/1 | HM067622 |
DENV-1/CO/198_Tolima/1998 | Tolima | 1998 | V/1 | HM067623 |
DENV-1/CO/199_Cundinamarca/1998 | Cundinamarca | 1998 | V/1 | HM067624 |
DENV-1/CO/204_Arauca/1998 | Arauca | 1998 | V/2 | HM067625 |
DENV-1/CO/206_SanAndres/1998 | San Andrés | 1998 | V/1 | HM067626 |
DENV-1/CO/207_SanAndres/1998 | San Andrés | 1998 | V/1 | HM067627 |
DENV-1/CO/208_SanAndres/1998 | San Andrés | 1998 | V/1 | HM067628 |
DENV-1/CO/210_SanAndres/1998 | San Andrés | 1998 | V/1 | HM067629 |
DENV-1/CO/211_SanAndres/1998 | San Andrés | 1998 | V/1 | HM067630 |
DENV-1/CO/251_Arauca/1998 | Arauca | 1998 | V/2 | HM067638 |
DENV-1/CO/252_SanAndres/1998 | San Andrés | 1998 | V/1 | HM067639 |
DENV-1/CO/269_Santander/1998 | Santander | 1998 | V/1 | HM067646 |
DENV-1/CO/270_Santander/1997 | Santander | 1998 | V/1 | HM067647 |
DENV-1/CO/280_Cundinamarca/1998 | Cundinamarca | 1998 | V/2 | HM067649 |
DENV-1/CO/319_Arauca/1998 | Arauca | 1998 | V/1 | HM067651 |
DENV-1/CO/498_Casanare/1998 | Casanare | 1998 | V/2 | HM067666 |
DENV-1/CO/501_Bogota/1998 | Bogotá | 1998 | V/2 | HM067669 |
DENV-1/CO/597_Huila/1998 | Huila | 1998 | V/1 | HM06768 |
DENV-1/CO/324_Cundinamarca/1998 | Cundinamarca | 1998 | V/2 | HM067652 |
DENV-1/CO/515_Guaviare/1999 | Guaviare | 1999 | V/2 | HM067676 |
DENV-1/CO/521_Amazonas/1999 | Amazonas | 1999 | V/2 | HM067677 |
DENV-1/CO/213_Caqueta/2000 | Caquetá | 2000 | V/2 | HM067631 |
DENV-1/CO/214_Nariño/2000 | Nariño | 2000 | V/2 | HM067632 |
DENV-1/CO/215_Cesar/2000 | Cesar | 2000 | V/2 | HM067633 |
DENV-1/CO/216_Cachicamo/2000 | Guaviare | 2000 | V/2 | HM067634 |
DENV-1/CO/253_Nariño/2000 | Nariño | 2000 | V/1 | HM067640 |
DENV-1/CO/277_Nariño/2000 | Nariño | 2000 | V/1 | HM067648 |
DENV-1/CO/288_Cachicamo/2000 | Guaviare | 2000 | V/2 | HM067650 |
DENV-1/CO/329_Caqueta/2000 | Caquetá | 2000 | V/2 | HM067653 |
DENV-1/CO/485_Caqueta/2000 | Caquetá | 2000 | V/2 | HM067663 |
DENV-1/CO/499_Guaviare/2000 | Guaviare | 2000 | V/2 | HM067667 |
DENV-1/CO/506_Cesar/2000 | Cesar | 2000 | V/2 | HM067671 |
DENV-1/CO/508_Tolima/2001 | Tolima | 2001 | V/2 | HM067672 |
DENV-1/CO/254_Quindio/2002 | QuindÃo | 2002 | V/1 | HM067641 |
DENV-1/CO/347_Quindio/2002 | QuindÃo | 2002 | V/2 | HM067654 |
DENV-1/CO/348_Quindio/2002 | QuindÃo | 2002 | V/2 | HM067655 |
DENV-1/CO/351_Guajira/2002 | Guajira | 2002 | V/2 | HM067656 |
DENV-1/CO/486_Quindio/2002 | QuindÃo | 2002 | V/2 | HM067664 |
DENV-1/CO/487_Quindio/2002 | QuindÃo | 2002 | V/2 | HM067665 |
DENV-1/CO/502_Guaviare/2002 | Guaviare | 2002 | V/2 | HM067670 |
DENV-1/CO/232_Meta/2003 | Meta | 2003 | V/2 | HM067635 |
DENV-1/CO/364_Caqueta/2003 | Caquetá | 2003 | V/2 | HM067657 |
DENV-1/CO/381_Valle/2003 | Valle | 2003 | V/2 | HM067658 |
DENV-1/CO/387_Valle/2003 | Valle | 2003 | V/2 | HM067659 |
DENV-1/CO/123_Putumayo/2004 | Putumayo | 2004 | V/2 | HM067616 |
DENV-1/CO/235_Putumayo/2004 | Putumayo | 2004 | V/2 | HM067636 |
DENV-1/CO/509_Huila/2004 | Huila | 2004 | V/2 | HM067673 |
DENV-1/CO/510_Huila/2004 | Huila | 2004 | V/2 | HM067674 |
DENV-1/CO/511_Huila/2004 | Huila | 2004 | V/2 | HM067675 |
DENV-1/CO/250_Putumayo/2005 | Putumayo | 2005 | V/2 | HM067637 |
DENV-1/CO/446_Putumayo/2005 | Putumayo | 2005 | V/2 | HM067660 |
DENV-1/CO/457_Putumayo/2005 | Putumayo | 2005 | V/2 | HM067661 |
DENV-1/CO/471_Guainia/2005 | GuainÃa | 2005 | V/2 | HM067662 |