Table 2 Summary of patient tissues and fluids used for the detection of HPV.
From: Detection and quantitation of HPV in genital and oral tissues and fluids by real time PCR
Sample | Sample origin | HPV (previously typed) | HPV E1 qPCR | HPV L1 qPCR |
|---|---|---|---|---|
962046 | anal virapap swab | 11 | + | 11 |
950450 | anal virapap swab | 16 | + | 16 |
972696 | anal virapap swab | 33‡ | + | - |
971380 | anal virapap swab | 35‡ | + | - |
000699 | anal virapap swab | 40* | + | - |
061675 | anal virapap swab | 45§ | + | - |
983165 | anal virapap swab | 52‡ | + | - |
972762 | anal virapap swab | 54 | + | - |
972666 | anal virapap swab | 59§ | + | - |
980280 | anal virapap swab | 69 | + | - |
980520 | anal virapap swab | 73 | + | - |
950474 | anal virapap swab | 83 | + | - |
081673 | anal virapap swab | 89 | + | - |
950472 | anal virapap swab | 16,53 | + | 16 |
950508 | anal virapap swab | 56,68§,84 | + | - |
950504 | anal virapap swab | 6,11,18,26,33,45§,54,73 | + | 6,11,18 |
950496 | anal virapap swab | 6,16,45§,53,58‡,61,70§,83,84 | + | 6 |
071455 | anal preservecyt swab | 42 | + | - |
071537 | anal preservecyt swab | 51 | + | - |
071113 | anal preservecyt swab | 71 | + | - |
071424 | anal preservecyt swab | 81 | + | - |
963601 | Cervical lavage | 67‡ | + | - |
950475 | cervical virapap swab | 6 | + | 6 |
950505 | cervical virapap swab | 18 | + | 18 |
950507 | cervical virapap swab | 26 | + | - |
962678 | cervical virapap swab | 31‡ | + | - |
950433 | cervical virapap swab | 32 | + | - |
962047 | cervical virapap swab | 53 | + | - |
950479 | cervical virapap swab | 54 | + | - |
972833 | cervical virapap swab | 55* | + | - |
962721 | cervical virapap swab | 66 | + | - |
972835 | cervical virapap swab | 82 | + | - |
971371 | cervical virapap swab | 84 | + | - |
036465 | cervical virapap cytobrush | 58‡ | + | - |
040670 | cervical preservecyt swab | 56 | + | - |
CL1 | Cervical lavage | N/D | - | - |
CL2 | Cervical lavage | N/D | + | 6/16 |
CL3 | Cervical lavage | N/D | + | - |
CL4 | Cervical lavage | N/D | - | - |
CL5 | Cervical lavage | N/D | - | - |
CL6 | Cervical lavage | N/D | + | 6 |
CL7 | Cervical lavage | N/D | + | 6,18 |
CL8 | Cervical lavage | N/D | - | - |
CL9 | Cervical lavage | N/D | - | - |
CL10 | Cervical lavage | N/D | - | - |
CL11 | Cervical lavage | N/D | + | - |
CL12 | Cervical lavage | N/D | - | - |
CL13 | Cervical lavage | N/D | - | - |
CL14 | Cervical lavage | N/D | - | - |
CL15 | Cervical lavage | N/D | - | - |
CL16 | Cervical lavage | N/D | - | - |
CL17 | Cervical lavage | N/D | - | - |
CL18 | Cervical lavage | N/D | + | - |
CL19 | Cervical lavage | N/D | - | - |
CL20 | Cervical lavage | N/D | - | - |
CL21 | Cervical lavage | N/D | + | 6 |
CL22 | Cervical lavage | N/D | - | - |
CL23 | Cervical lavage | N/D | + | - |
CL24 | Cervical lavage | N/D | - | - |
CL25 | Cervical lavage | N/D | - | - |
A1 | S/D Oral biopsy | N/D | - | - |
A2 | S/D Oral biopsy | N/D | - | - |
A3 | S/D Oral biopsy | N/D | - | - |
A4 | S/D Oral biopsy | N/D | - | - |
A5 | S/D Oral biopsy | N/D | - | - |
A6 | S/D Oral biopsy | N/D | - | - |
A7 | S/D Oral biopsy | N/D | - | - |
A8 | S/D Oral biopsy | N/D | - | - |
A9 | S/D Oral biopsy | N/D | - | - |
A10 | S/D Oral biopsy | N/D | - | - |
A11 | S/D Oral biopsy | N/D | - | - |
A12 | S/D Oral biopsy | N/D | - | - |
B1 | S/D Oral biopsy | N/D | - | - |
B2 | S/D Oral biopsy | N/D | - | - |
B3 | S/D Oral biopsy | N/D | - | - |
B4 | S/D Oral biopsy | N/D | - | - |
B5 | S/D Oral biopsy | N/D | - | - |
B6 | S/D Oral biopsy | N/D | - | - |
B7 | S/D Oral biopsy | N/D | - | - |
B8 | S/D Oral biopsy | N/D | - | - |
B9 | S/D Oral biopsy | N/D | - | - |
B10 | S/D Oral biopsy | N/D | - | - |
B11 | S/D Oral biopsy | N/D | - | - |
B12 | S/D Oral biopsy | N/D | + | 16 |
C1 | S/D Oral biopsy | N/D | - | - |
C2 | S/D Oral biopsy | N/D | - | - |
C3 | S/D Oral biopsy | N/D | - | - |
C4 | S/D Oral biopsy | N/D | - | - |
C5 | S/D Oral biopsy | N/D | - | - |
C6 | S/D Oral biopsy | N/D | - | - |
C7 | S/D Oral biopsy | N/D | - | - |
C8 | S/D Oral biopsy | N/D | + | 16 |
C9 | S/D Oral biopsy | N/D | + | 16 |
C10 | S/D Oral biopsy | N/D | + | 16 |
C11 | S/D Oral biopsy | N/D | + | 16 |
C12 | S/D Oral biopsy | N/D | - | - |
D1 | S/D Oral biopsy | N/D | - | - |
D2 | S/D Oral biopsy | N/D | - | - |
D3 | S/D Oral biopsy | N/D | - | - |
D4 | S/D Oral biopsy | N/D | - | - |
D5 | S/D Oral biopsy | N/D | - | - |
D6 | S/D Oral biopsy | N/D | - | - |
D7 | S/D Oral biopsy | N/D | - | - |
D8 | S/D Oral biopsy | N/D | - | - |
D9 | S/D Oral biopsy | N/D | - | - |
D10 | S/D Oral biopsy | N/D | - | - |
D11 | S/D Oral biopsy | N/D | - | - |
D12 | S/D Oral biopsy | N/D | + | 16 |
E1 | S/D Oral biopsy | N/D | + | 16 |
E2 | S/D Oral biopsy | N/D | - | - |
E3 | S/D Oral biopsy | N/D | - | - |
E4 | S/D Oral biopsy | N/D | - | - |
E5 | S/D Oral biopsy | N/D | - | - |
E6 | S/D Oral biopsy | N/D | + | 16 |
3 | NS/ND Oral biopsy | 16 | N/D | 16 |
4 | NS/ND Oral biopsy | 16 | N/D | 16 |
7 | NS/ND Oral biopsy | - | N/D | - |
9 | NS/ND Oral biopsy | 16 | N/D | 16 |
12 | NS/ND Oral biopsy | 16 | N/D | - |
13 | NS/ND Oral biopsy | 16 | N/D | 16 |
15 | NS/ND Oral biopsy | - | N/D | - |
16 | NS/ND Oral biopsy | - | N/D | 18 |
18 | NS/ND Oral biopsy | - | N/D | - |
20 | NS/ND Oral biopsy | - | N/D | - |
21 | NS/ND Oral biopsy | 18 | N/D | - |
23 | NS/ND Oral biopsy | 16 | N/D | - |
27 | NS/ND Oral biopsy | - | N/D | - |
32 | NS/ND Oral biopsy | - | N/D | - |
35 | NS/ND Oral biopsy | 18 | N/D | 6/18 |
36 | NS/ND Oral biopsy | - | N/D | - |
37 | NS/ND Oral biopsy | 18 | N/D | - |
38 | NS/ND Oral biopsy | - | N/D | - |
39 | NS/ND Oral biopsy | 18 | N/D | - |
40 | NS/ND Oral biopsy | 16 | N/D | 16 |
51 | NS/ND Oral biopsy | 16 | N/D | 16 |
52 | NS/ND Oral biopsy | 16 | N/D | - |
082481 | Foot plantar wart | 2 | + | - |
082458 | Foot plantar wart | 57 | + | - |
MX1 | 28 | + | - | |
MX2 | 64 | + | - |