Table 2 Capsid-E3-E2-6K and nsP3 primer pair details
From: Molecular epidemiology of salmonid alphavirus (SAV) subtype 3 in Norway
Gene fragment | Forward primer | Forward primer sequence | Reverse Primer | Reverse primer sequence |
|---|---|---|---|---|
C-E3-E2-6K | F1600 | CGGCACTATCAGAGTGGAGGA | R2375 | AGGATGTAGTGGCCGGTGG |
C-E3-E2-6K | F2234 | CGGGTGAAACATCTCTGCG | SAV20R | GGCATTGCTGTGGAAACC |
C-E3-E2-6K | E2666F | GCGACCGTTACCTTTACCAGCG | E2YR | CAGCACAGTCTGCAGTGTCTAAG |
nsP3 | nsP3YF | GAAAGTGGCGGAGATCCTCA | nsP3940R | TGAGCGGCAGTTTGAATGC |
nsP3 | nsP3930F | ACTGCCGCTCACTAACATCCA | nsP3YR | GGGTATTATGCTGGCTAAGGTGAG |