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Table 2 Nucleotide and amino acid substitutions in the informative sites of genotype II.

From: Genetic diversity of the E Protein of Dengue Type 3 Virus

Nucleotide Protein Domains
   Genotype II      
     Lineage I Lineage II Position Lineage I   
Position Lineage Sub-Lineage Sub-Lineage   Sub-Lineage Type of amino acid Changes  
Gene Codon I II I II I II Protein I II   
54 3    T A        I
90 3      C T      
96 3      T C      
273 3    A G        II
351 3    G A        
419 2    T C    140 I T Nonconservative I
549 3    C T        
525 3 A G          
558 3    G C        
609 3 A C          II
708 3 G A          
747 3    T C        
834 3    T C        
963 3    G A        III
1002 3 T C          
1134 3    G C        
1176 3    T A        
1188 3    C C        TM
1233 3    A T        
1339 1    T G    447 S G Nonconservative  
1436 2    G C        
1465 1    A A        
1467 3    T T    489 A T Nonconservative  
  1. Domain I: 1–156nt (1–52aa); 397–573nt (133–191aa); 835–882nt (279–294aa)
  2. Domain II: 157–396nt (53–132aa); 574–834nt (192–278aa)
  3. Domain III: 883–1176nt (295–392aa)
  4. Domain TM: 1177–1479nt (393–493aa)
  5. nt:are indicated the nucleotide positions
  6. aa::are indicated the amino acid positions