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Table 3 GenBank reference sequence information.

From: Diversification of West Nile virus in a subtropical region

Abbreviation Year of Isolation Location Source GenBank accession no.
1998 Isreael 1998 Israel Ciconia ciconia AY033389
NY99 1999 Bronx Co., NY Phoenicopterus chilensis AF196835
2001 Suffolk NY 2001 Suffolk Co., NY Culex pipiens/restuans DQ164194
2002 Nassau NY 2002 Nassau Co., NY Culex pipiens/restuans DQ164195
2002 Queens NY 2002 Queens Co., NY Corvus brachyrhynchos DQ164186
2002 Indiana 2002 Indiana Human – Plasma DQ164200
2002 Ohio 2002 Ohio Human – Plasma DQ164202
2002 Georgia 1 2002 Georgia Human – Plasma DQ164196
2002 Georgia 2 2002 Georgia Human – Brain DQ164197
2002 Clinton NY 2002 Clinton Co., NY Corvus brachyrhynchos DQ164193
2002 Texas 2 2002 Texas Human – Plasma DQ164205
2002 Texas 1 2002 Texas Human – Plasma DQ164198
2002 Broome NY 2002 Broome Co., NY Corvus brachyrhynchos DQ164187
2003 Albany NY 2003 Albany Co., NY Corvus brachyrhynchos DQ164189
2003 Suffolk NY 2003 Suffolk Co., NY Corvus brachyrhynchos DQ164190
2003 Colorado 1 2003 Colorado Buteo jamaicensis DQ164204
2003 Mexico 2003 Nuevo Leon, Mexico Culex quinquefasciatus AY963775
WN-FL03p2-3 2003 Indian River Co., FL Culex nigripalpus DQ983578
2003 Colorado 2 2003 Colorado Pica hudsonia DQ164203
2003 Chautauqua NY 2003 Chautauqua Co., NY Corvus brachyrhynchos DQ164191
2003 Texas 2003 Texas Human – Plasma DQ164199
2003 Rockland NY 2003 Rockland Co., NY Corvus brachyrhynchos DQ164192
2003 Westchester NY 2003 Westchester Co., NY Corvus brachyrhynchos DQ164188
2004 Arizona 2004 Arizona Human – Plasma DQ164201
2004 Texas – Harris 2004 Harris Co., TX Culex quinquefasciatus AY712948
  1. West Nile virus isolates used in the construction of the Envelope and NS3/NS4A phylogentic trees.
  2. *NT positions refer to amplicon location with respect to "WNV RNA, Complete Genome" GenBank accession number