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Table 4 List of antigenic sites observed in the hemagglutinin structure.

From: Correlating novel variable and conserved motifs in the Hemagglutinin protein with significant biological functions

Site

Amino Acid Positions

Overlaps with...

A

143–146

HA1, MEME7, CKII, ASN

B

187–196

HA1, MEME2, PKC

C & D

3

MEME10

 

31

MEME2

 

53

MEME5

 

54

MEME5, ASN

 

63

MEME5

 

78

MEME9, Myristyl

 

83

MEME9, CKII

 

110

MEME1

 

122

MEME1

 

133

MEME7

 

137

MEME7

 

155

MEME7, Myristyl

 

164

MEME7

 

174

MEME11, PKC

 

182

MEME2, ASN

 

186

MEME2

 

201

MEME2

 

205

MEME2, CKII, PKC

 

207

MEME2

 

208

 
 

217

MEME3, PKC

 

220

MEME3

 

226

MEME3

 

228

MEME3

 

242

MEME3

 

260

MEME6

 

275

MEME6

 

278

MEME6, PKC

 

327

MEME4

  1. Antigenic sites A-D [11] were mapped to our consensus sequences and tabulated with overlapping MEME motif, entropy values and post-translational modifications sites. Site A average entropy is based on amino acid position 144 and 145, while site B average entropy is based on amino acid position 188 and 189.