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Table 2 The difference between complete M segment of CCHFV strain Kosova Hoti and other strains in the V. group (Europe/Turkey) calculated by the MegAlign module. Table includes a separate column for the Mucin-like variable region present in M segment.

From: The complete genome sequence of a Crimean-Congo Hemorrhagic Fever virus isolated from an endemic region in Kosovo

M segment, difference (%) Kosova Hoti   
CCHFV strain nt sequence (complete) nt sequence (ORF) aa sequence non- synonymous mutations (%) Mucin-like VR, aa 28–251 (% difference)
Kosovo, 9553-01 2.3 2.2 1.9 86 4.5
Turkey, 200310849 5.7 5.6 4.8 85 20.5
Russia, Drosdov 5.2 5.1 4.3 84 15.2
Russia, Kashmanov 5.4 5.2 4.5 86 19.6
Russia, VLV-100 5.7 5.4 4.5 83 20.1
  1. CCHFV strains are presented by the country of origin and the name of the strain. Accession numbers are shown in the legend of Figure 1B. nt – nucleotide; aa – amino acid, ORF – open reading frame.