Table 2 Comparison between CTL epitope sequences included in lipopeptides and SIV mac251 isolate
| Â | pre-SIV challenge - CTL responses | sequences of SIV mac251 challenge isolate | |
|---|---|---|---|
Macaque # | epitopic peptides | sequences | Â |
125 | NEF 169–178 | KTFGWLWKLV | KTFGWLWKLV 11/11 |
105 | NEF 128–136 | GLEGIYYSA | GLEGIYYS 9/11 GLEGIYY T 2/11 |
127 | NEF 116–126 | AIDMSHFIKEK | AIDMSHFIKEK 11/11 |
129 | NEF 128–136 | GLEGIYYSA | GLEGIYYSA 9/11 GLEGIYYST 2/11 |
|  | NEF 169–178 | KTFGWLWKLV | KTFGWLWKLV 11/11 |
|  | NEF 201–211 | SKWDDPWGEVL | SKWDDPWGEVL 9/11 SR WDDPWGEVL 1/11 SQ WDDPWGEVL 1/11 |
|  | NEF211–219 | LAWKFDPTL | LAWKFDPTL 10/11 LAWKFDPA L 1/11 |
109 | NEF 101–110 | SVRPKVPLRA | P VM PR VPLRT 8/11 P VM PR VPLRA 1/11 SVRPKVPLRT 1/11 SMK PR VPLRT 1/11 |
|  | NEF 116–126 | AIDMSHFIKEK | AIDMSHFIKEK 11/11 |
|  | NEF 128–136 | GLEGIYYSA | GLEGIYYSA 9/11 GLEGIYYST 2/11 |
|  | NEF 169–178 | KTFGWLWKLV | KTFGWLWKLV 11/11 |
|  | NEF 215–225 | FDPTLAYTYEA | FDPTLAYTYEA 10/11 FDPALAYTYEA 1/11 |
| Â | GAG -175 | WIQLGLQKCV | WIQLGLQKCV 11/11 |