Skip to main content

Table 2 Alignment of preanchor domain sequences from representative flaviviruses.

From: Peptide inhibitors of dengue virus and West Nile virus infectivity

Virus a

Pre-anchor sequence b

Location c

   DENV-1

AILGDTAWDFGSIGGVFTSVGKLIHQIFGTA

693–723

   DENV-2

AILGDTAWDFGSLGGVFTSIGKALHQVFGAI

693–723

   DENV-3

AILGDTAWDFGSVGGVLNSLGKMVHQIFGSA

691–721

   DENV-4

AILGETAWDFGSVGGVLTSLGKAVHQVFGSV

692–722

   WNV

AVLGDTAWDFGSVGGVFTSVGKAVHQVFGGA

709–739

   YFV

AVMGDTAWDFSSAGGFFTSVGKGIHTVFGSA

695–725

   SLEV

AVLGDTAWDFGSIGGVFTSIGKALHQVFGGA

707–737

   JEV

AALGDTAWDFGSIGGVFNSIGKAVHQVFGGA

712–742

   TBEV

TVIGEHAWDFGSAGGFLSSIGKAVHTVLGGA

694–724

   OHFV

TVLGEHAWDFGSTGGFLSSIGKALHTVLGGA

694–724

   KFV

TVVGEHAWDFGSVGGMLSSVGKALHTAFGAA

695–725

   POWV

SVVGEHAWDFGSVGGVLSSVGKAIHTVLGGA

693–723

  1. aDENV: dengue virus; WNV: West Nile virus; YFV: yellow fever virus; SLEV: St. Louis encephalitis virus; JEV: Japanese encephalitis virus; TBEV: Tick-borne encephalitis virus; OHFV: Omsk hemorrhagic fever virus; KFV: Kyasanur Forest virus; POWV: Powassan virus
  2. b * = identical or chemically similar amino acids in every sequence
  3. cnumbering from the beginning of the E polyprotein.