Figure 4

CLRDV mapping. A – Graphical of viral unique reads distribution of CLRDV-infected leaves smallRNA dataset using the genome of CLRDV-ARG as reference genome. In gray reads in sense orientation are shown and in yellow the reads showing antisense orientation. Red bar at bottom shows the total of mapped genomes and white block represents gaps not covered by the analysis. X-axis is showing the total number of reads. B – Details of divergent points in ORF3 (CP) nucleotide alignment. C – Capsid protein (ORF3) amino acids alignment. D – P1 protein amino acids alignment. Arrows are indicating divergent amino acids. Next_generation corresponds to the genome reconstructed, CLRDV PV1 and CLRDV ARG corresponds to Brazilian and Argentinean isolates, respectively.