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Table 3 Population diversity and structure within SLCV and WmCSV samples in this study

From: Frequent migration of introduced cucurbit-infecting begomoviruses among Middle Eastern countries

 

Collection site

SLCV

WmCSV

Number of sequences

π

FST

Number of sequences

π

FST

Egypt

 

15

0.0093

0.0638

   
 

1

7

0.012

    
 

2

8

0.0060

    

Israel

 

38

0.0081

0.0146

31

0.0066

0.183

 

1

13

0.012

 

9

0.0064

 
 

2

12

0.0056

 

11

0.0043

 
 

3

13

0.0061

 

11

0.0064

 

Jordan

 

59

0.0040

0*

56

0.0058

0.311

 

1

20

0.0042

 

17

0.0018

 
 

2

20

0.0041

 

19

0.0060

 
 

3

19

0.0042

 

20

0.0054

 

Lebanon

 

11

0.0122

0.0193

   
 

1

1

     
 

2

3

0.012

    
 

3

6

0.012

    
 

4

1

     

Palestine

 

26

0.0047

0.116

19

0.0055

0.462

 

1

10

0.0053

 

10

0.0029

 
 

2

10

0.0029

 

9

0.0048

 
 

3

6

0.0048

    

All

 

149

0.0077

± 0.00077

0.253

106

0.0066 ± 0.00019

0.151

  1. Fst is the fixation index, π is per-site, pairwise nucleotide diversity.
  2. *This Fst value was negative, rounded to zero.
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Virology Journal

ISSN: 1743-422X