Table 2 Closest neighbour to the 2003 and 2010 samples based on phylogenetic analysis
Gene fragment | Closest neighbour to 2003 | Closest neighbour to 2010 |
|---|---|---|
5’NCR | EV74 | EV74 |
VP4 | EV101 | EV101 |
VP2 | CVA-9 | CVA-9 |
VP3 | CVA-9 | CVA-9 |
VP1 | CVA-9 | CVA-9 |
2A Protease | Echo 25 | Echo 25 |
2B Protein | CVB-5 and echo14 | CVB-5 and echo14 |
2C Helicase | Echo 25 | CVB-6 |
3A protein | Echo 16 and CVB-6 | EV 86 |
3B Protein (VPg) | Echo 14 and CVB-5 | Echo 14 and CVB-5 |
3C Protease | Echo 13 | EV 100 |
3D Protein (Pol) | Echo 13 | EV 86 |