Table 3 Comparison of HCV NS3(4A) region of Los Alamos and vertex sequences
Subtype | Sequence domain | Number of sequences° | Length of alignment (base pair) | Mean Shannon entropy | Average pairwise difference (Standard deviation) |
|---|---|---|---|---|---|
1a | Los Alamos Sequences | 695 | 2067 | 0.132014 | 7.5% (± 1.9%) |
|  | Vertex Sequences | 2111* | 2085 | 0.175243 | 9.1% (± 4.6%) |
1b | Los Alamos Sequences | 561 | 2067 | 0.158275 | 9.3% (± 1.5%) |
|  | Vertex Sequences | 1335†| 2085 | 0.202466 | 10.6% (± 3.4%) |