Figure 1
From: Detection of novel viruses in porcine fecal samples from China
Sequences sharing similarity with astrovirus MLB1, porcine bocavirus 1 and Ljungan virus. Viral sequences were positionally mapped to the complete genome of (A) astrovirus MLB1 (GenBank FJ402983), (B) porcine bocavirus 1 (GenBank HM053693) and (C) Ljungan virus (GenBank NC_003976.2) based on the similarities of the associated amino acid sequences to the corresponding reference genome proteins. Contig 22 of astrovirus exhibited the highest homology with the capsid protein of porcine astrovirus PAstV-2 (ADP21511.1) but no detectable homology with astrovirus MLB1; therefore, this is not shown on the map. Blue bar: reference genome; red bar: viral sequences that share homology with the reference genome; dotted line: viral sequences that have no homology to the reference genome; vertical line: sequences between the vertical lines were used in the phylogenetic analysis.