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Table 3 Inter and intraclade recombinants

From: Characterization of HIV-1 gag and nef in Cameroon: further evidence of extreme diversity at the origin of the HIV-1 group M epidemic

Sample ID

gag gene

nef gene

BS02

A-likea

CRF02_AG

BS09

CRF02_AG

A1

BS11

CRF02_AG

F

BS13

CRF02_AG

A1

BS25

CRF02_AG

F

BS29

CRF02_AG

Ua

BS42

CRF02_AG

CRF01_AEa

BS39

CRF02_AG

CRF02_AG/CRF02_AG

BS55

CRF02_AG/CRF02_AG

F

BS05

CRF02_AG/CRF02_AG

NDb

BS65

CRF22_01A1

CRF01_AE

BS72

CRF36_cpxa/F2a

CRF01_AE/F

BS57

CRF11_cpxa/CRF11_cpx

NDb

BS12

G

G/G

BS48

G

G/G

BS51

G

G/G

  1. aOutlier; bND: Not done.