Table 2 Organisms used for the specificity panel
From: A cost effective real-time PCR for the detection of adenovirus from viral swabs
Name | Real-time PCR Result | |
|---|---|---|
Nucleic acid extraction | Homogenization and heat treatment | |
HAdV-A, type 31 | + | + |
HAdV-B, type 3 | + | + |
HAdV-B, type 7 | + | + |
HAdV-B, type 14 | + | + |
HAdV-B type 34 | + | + |
HAdV-C, type 1 | + | + |
HAdV-C, type 2 | + | + |
HAdV-C, type 6 | + | + |
HAdV-D, type 8 | + | + |
HAdV-D, type 10 | + | + |
HAdV-D, type 20 | + | + |
HAdV-D, type 26 | + | + |
HAdV-D, type 29 | + | + |
HAdV-E, type 4 | + | + |
HAdV-F, type 40 | + | + |
Influenza A (pandemic H1N1, seasonal H1N1 and seasonal H3N2) | - | - |
Influenza B (Victoria and Yamagata lineages) | - | - |
Parainfluenza virus (types 1 to 4) | - | - |
Respiratory syncytial virus (types A and B) | - | - |
Human coronaviruses (229E, OC43, NL63, and HKU1) | - | - |
Human metapneumovirus | - | - |
Rhinovirus (A, B or C) | - | - |
Human bocavirus | - | - |
Human herpesvirus (types 1–5, 6a, 6b, 7 and 8) | - | - |
Streptococcus pneumoniae | - | - |
Haemophilus influenzae | - | - |
Moraxella catarrhalis | - | - |
Legionella pneumophila | - | - |
Mycoplasma pneumoniae | - | - |
Staphylococcus aureus | - | - |
Staphylococcus epidermidis | - | - |
Pseudomonas aeruginosa | - | - |
Escherichia coli | - | - |
Neisseria gonorrhoeae | - | - |
Chlamydia trachomatis | - | - |