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Table 1 Conserved HIV protein regions containing multiple epitopes

From: Synthetic immunotherapy induces HIV virus specific Th1 cytotoxic response and death of an HIV-1 infected human cell line through classic complement activation

Name

Consensus sequence

Locationa

Length

VPR

GDTWAGVEAIIRILQQLLFIHFRIGCQHSR

51 to 80

30

VIF

KVGSLQYLALTALITPKKIKPPLPSVKKLTEDRWNKPQKT

142 to 181

40

REV

EPVPLQLPPLERLTLDCSEDCGTSGTQ

69 to 95

27

NEF

YKGALDLSHFLKEKGGLEGLIYSQKRQDILDLWVYHTQGYFPD

81 to 123

43

M1A*

DLEALMEWLKTRPILSPLTKGILGFVFTLTVP

36 to 67

32

M1B*

LLYCLMVMYLNPGNYSMQVKLGTLCALCEKQASHS

124 to 158

35

NPA*

DLIFLARSALILRGSVAHKSC

255 to 275

21

NPB*

PGIADIEDLTLLARSMVVVRP

306 to 326

21

PB1*

LLIDGTASLSPGMMMGMFNMLSTVLGVSILNLGQ

395 to 428

34

M2*

IIGILHLILWILDRLFFKCIYRLF

32 to 55

24

  1. aAmino acid location for each sequence is referenced to the consensus sequence defined for that protein. The length of the polypeptide is expressed as number of aminoacids. Marked with (*) are the aminoacid sequences component of NRP-v.