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Table 2 Pairwise comparison of nucleotide sequence identities of NZ-2010-541 with other EV68 strains (shown in %)

From: Detection and whole genome sequence analysis of an enterovirus 68 cluster

Strain

Accession number

Genome

5′UTR

P1

P2

P3

3′UTR

JPOC10-378

AB601883

91.3

92.9

90.9

91.0

91.3

98.5

Fermon

AY426531

88.5

90.2

87.8

88.7

87.9

95.5

37-99

EF107098

93.4

93.0

93.2

93.4

93.4

100.0

  1. Alignment was performed using the ClustalW algorithim in MEGA, with pairwise distance calculations based upon ungapped regions of the alignment.
  2. 5’ UTR = 5’ untranslated region; P1 = precursor P1; P2 = precursor P2; P3 = precursor P3.
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Virology Journal

ISSN: 1743-422X