Single injection recombinant vesicular stomatitis virus vaccines protect ferrets against lethal Nipah virus disease
© Mire et al.; licensee BioMed Central Ltd. 2013
Received: 21 November 2013
Accepted: 3 December 2013
Published: 13 December 2013
Nipah virus (NiV) is a highly pathogenic zoonotic agent in the family Paramyxoviridae that is maintained in nature by bats. Outbreaks have occurred in Malaysia, Singapore, India, and Bangladesh and have been associated with 40 to 75% case fatality rates. There are currently no vaccines or postexposure treatments licensed for combating human NiV infection.
Methods and results
Four groups of ferrets received a single vaccination with different recombinant vesicular stomatitis virus vectors expressing: Group 1, control with no glycoprotein; Group 2, the NiV fusion protein (F); Group 3, the NiV attachment protein (G); and Group 4, a combination of the NiV F and G proteins. Animals were challenged intranasally with NiV 28 days after vaccination. Control ferrets in Group 1 showed characteristic clinical signs of NiV disease including respiratory distress, neurological disorders, viral load in blood and tissues, and gross lesions and antigen in target tissues; all animals in this group succumbed to infection by day 8. Importantly, all specifically vaccinated ferrets in Groups 2-4 showed no evidence of clinical illness and survived challenged. All animals in these groups developed anti-NiV F and/or G IgG and neutralizing antibody titers. While NiV RNA was detected in blood at day 6 post challenge in animals from Groups 2-4, the levels were orders of magnitude lower than animals from control Group 1.
These data show protective efficacy against NiV in a relevant model of human infection. Further development of this technology has the potential to yield effective single injection vaccines for NiV infection.
KeywordsNipah virus Henipavirus Vaccine Vesicular stomatitis virus Ferret Fusion protein Attachment protein Glycoprotein Single-injection Immunity
Nipah virus (NiV) and Hendra virus (HeV) represent the highly pathogenic zoonotic agents in the paramyxovirus genus Henipavirus with human case fatality rates ranging between 40 and 75% . These viruses are categorized as biosafety level 4 (BSL4) pathogens due to the significant morbidity and mortality associated with disease and the lack of approved vaccines and therapeutics for human use. The primary reservoir for henipaviruses are bats of the genus Pteropus; however; the viruses can be transmitted to many mammalian species including humans. Currently, there are two distinct strains of NiV: 1) the Malaysia strain (NiVM) discovered in 1999 during an outbreak on pig farms which resulted in spread to humans ; and 2) the Bangladesh strain (NiVB), which was discovered in India and Bangladesh during 2001 . NiVB has been linked to direct transmission from bats to humans and evidence suggests human to human transmission is possible .
The near annual outbreaks of NiVB with high case fatality rates  underscores the urgent need for effective vaccines and therapeutics. To date, there have been four experimental preventive candidate vaccines against henipaviruses evaluated in animal models. Vaccinia and canarypox viruses encoding the NiVM glycoproteins have shown protection against NiVM in hamsters and pigs [7, 8]. A recombinant adeno-associated vaccine expressing the NiVM G protein completely protected hamsters against homologous NiVM challenge and protected 50% of animals against heterologous HeV infection . In addition, a recombinant subunit vaccine based on the HeV G protein (sGHeV) completely protects small animals against lethal HeV and NiVM infection [10–13] and more recently was shown to be efficacious in the robust African green monkey model of NiVM infection . Though very promising, the sGHeV vaccine requires a prime-boost strategy to confer protection whereas a single-injection vaccine would be particularly beneficial during outbreaks where there is little time to employ lengthy vaccination regimens.
Single-injection recombinant vesicular stomatitis virus (rVSV) vectors have been developed as vaccine candidates against many important human pathogens such as papillomavirus [15, 16], human immunodeficiency virus (HIV) [17–19], influenza virus , measles virus [21, 22], respiratory syncytial virus [23, 24], severe acute respiratory syndrome coronavirus , chikungunya virus , and hemorrhagic fever viruses such as Lassa, Ebola, and Marburg . Single-cycle replication rVSVs have been developed against NiV and have shown strong immunogenicity in mice vaccinated with rVSVs expressing either the NiVM fusion protein (F) or the NiVM attachment protein (G) as high neutralizing antibody titers were generated . These vaccine vectors were just recently shown to provide homologous protection in the hamster model of NiVM infection .
Here, we developed alternative rVSV vaccine vectors expressing either the NiVB F or NiVB G proteins. These vaccines were evaluated 28 days after a single dose vaccination in the NiVM ferret model, which along with the African green monkey, most faithfully recapitulates human disease [30–32]. Each group of specifically vaccinated ferrets were protected from NiVM-induced disease while the non-specifically vaccinated ferrets succumbed to NiVM infection. To date, this is the first study to protect ferrets from NiV infection using a single-injection vaccine.
Recovery of rVSVΔG-NiVB/glycoprotein vectors
Immunization of ferrets and examination of the humoral immune response
NiV challenge of vaccinated ferrets
Clinical description and outcome of Nipah virus challenged ferrets
Clinical and gross pathology
Fever (d5-7); Depression (d6-7); lethargy (d6-7); loss of appetite (d6-7); labored breathing (d6-7). Animal euthanized on d7.
Thrombocytopenia (d7); Lymphopenia (d6-7); >3-fold increase in BUN (d7); rash on ventral surface of neck; lungs with severe congestion and hemorrhage of all lobes; enlarged spleen; darkened liver, edema of left kidney capsule.
Fever (d5); depression (d6-8); lethargy (d6-8) loss of appetite (d6-8); labored breathing (d6-8); dehydration (d8), ocular and nasal discharge (d7-8); Hind limb paresis (d8) Animal euthanized on d8.
Thrombocytopenia (d8); Lymphopenia (d6,8); >3-fold increase in BUN (d8); hypoalbuminemia (d6,8); ecchymotic rash on ventral surface of neck; lungs with severe congestion and hemorrhage of all lobes; enlarged spleen; darkened liver.
Fever (d4-7); depression (d5-7); lethargy (d5-7); loss of appetite (d5-7); labored breathing (d6-7); ocular and nasal discharge (d6-7); Hind limb paresis (d7). Animal euthanized d7.
Thrombocytopenia (d6-7); Lymphopenia (d6-7); hypoalbuminemia (d6-7); ecchymotic rash on ventral surface of neck; lungs with severe congestion and hemorrhage of all lobes; enlarged spleen; darkened liver.
Fever (d5-7); Depression (d6-8); lethargy (d7-8); loss of appetite (d6-8); labored breathing (d6-8); hind limb tremors (d8). Animal euthanized on d8.
Thrombocytopenia (d8); Lymphopenia (d6,8); hypoalbuminemia (d8); lungs with severe congestion and hemorrhage of all lobes; enlarged spleen; darkened liver.
Fever (d5-7); Depression (d6-7); lethargy (d7); loss of appetite (d5-7); dehydration (d7); labored breathing (d6-7). Animal euthanized on d7.
Thrombocytopenia (d7); Lymphopenia (d6-7); hypoalbuminemia (d7); lungs with severe congestion and hemorrhage of all lobes; enlarged spleen; darkened liver.
Mild fever (d7)
Histopathological and immunohistochemical analysis of NiVM-infected ferrets
Neutralizing NiVM antibody titers pre and post challenge with NiVM
While significant progress on a veterinary vaccine for one henipavirus, HeV, has been made , the development of effective human vaccines and antiviral drugs for high consequence pathogens such as NiV is a much slower and complicated process. In particular, the restriction of infectious NiV work to BSL-4 containment has hampered progress. Conventional clinical trials with viruses such as NiV are not practical. To address the development of countermeasures for exotic pathogens such as NiV the FDA implemented the Animal Efficacy Rule in 2002. This rule specifically applies to the development of countermeasures when human efficacy studies are not possible or ethical. Briefly, this rule permits the evaluation of vaccines or therapeutics using data generated from studies performed in animal models that faithfully recapitulate human disease. There are currently at least eight animal models for NiV including the IFNAR-KO mouse model ; the guinea pig model ; the pig model [8, 37–39]; the cat model [10, 11]; the golden Syrian hamster model [7, 40–42]; the ferret model [30, 43]; and two nonhuman primate models, one in squirrel monkeys  and the other in African green monkeys . While each of these models shares at least one or more aspects seen in human pathogenesis and can contribute to vaccine and therapeutic testing, the two animal models which completely emulate the pathogenesis seen in human cases to date are the ferret model and the African green monkey model. These models recapitulate what is seen during human infection with severe respiratory and neurologic disease and a generalized vasculitis.
Based on this knowledge, the ferret model was chosen for the initial evaluation of our rVSV-ΔG-NiVB-F/G-GFP vectors. This model should be considered as the initial small animal screening model for vaccines against NiV, especially since the recombinant sGHeV protein vaccine has been shown to be efficacious in ferrets  and African green monkeys . While sGHeV vaccine has proven to have utility against NiV infection in these two animal models, the vaccine regimen requires two doses using a prime-boost strategy with the two adjuvants CpG oligodeoxynucleotide (ODN) 2006 and Alhydrogel included in the vaccine formulation . Here, we evaluated rVSV-ΔG-NiVB-F/G-GFP vectors as single-injection vaccines against lethal NiVM challenge in ferrets.
Non-specifically vaccinated control animals in Group 1 did not produce anti-NiV F or anti-NiV G IgGs, did not produce significant neutralizing antibody titers against NiVM, and thus were not protected from NiVM-induced disease as they displayed clinical symptoms and pathology consistent with NiVM infection, and had viral RNA and infectious virus isolated systemically. Animals in Group 2 vaccinated with GInd* rVSV-ΔG-NiVB/F-GFP generated anti-NiV F IgGs (and possible cross-reactive NiV G IgG, Figure 2C) and neutralizing antibody titers against NiVM and were protected from NiVM-induced disease with one animal (Table 1, 2-5) having a low-grade fever on day 7 p.c. Similarly, ferrets in Group 3 vaccinated with GInd* rVSV-ΔG-NiVB/G-GFP generated anti-NiV G IgGs and neutralizing antibody titers against NiVM and were protected from NiVM-induced disease. Using vectors that were independent of GInd* complementation, ferrets in Group 4 vaccinated with rVSV-ΔG-NiVB-F/G-GFP generated anti-NiV F and anti-NiV G IgGs and neutralizing antibody titers against NiVM and were also protected from NiVM-induced disease. The observation that the percent weight growth was less than Group 2 and 3 (Figure 3A) could have been due to the social housing of these animals where it is possible that certain members of the cohort were out competed for extra food as some animals in this group reached percent weight growth of animals from the other groups. While the protection afforded to Groups 2-4 did not appear to be sterile as virus replication could be detected by the presence of viral RNA in whole blood at day 6 p.c., it was only detected in two animals per group versus all animals in Group 1 (Table 1) and the mean virus replication was 100 times lower than what was detected in animals from Group 1 (Figure 6A).
The observation of anti-NiV F antibodies circulating in the rVSV-ΔG-NiVB/G-GFP vaccinated ferrets was interesting considering our experience with the Bioplex assay and sGHeV vaccinated ferrets and African green monkeys where we have never detected cross-reactivity against NiVM F from G vaccinated animals. One possible explanation is that the antibodies produced in response to the NiVB G results in the formation of some antibodies that can recognize NiVM F since the target antigen in the Bioplex assay is NiVM F. Our experience with the sGHeV vaccine may not be applicable here as this cross-reactivity may be a single-cycle replicating vaccine observation. While not within the scope of this study, the further examination of the avidity of these antibodies toward NiVM F is warranted as this rVSV-NiV vaccine platform is developed.
As it is difficult to determine which vaccine platform would be best for the human population against deadly pathogens such as NiV, it is important to develop and test a number of platforms to combat a potential outbreak. A preventive vaccine would be important for several populations: 1) the general population during NiV outbreaks particularly in endemic areas in India and Bangladesh; 2) healthcare workers and family members involved in patient care and management in endemic regions; 3) personnel involved in outbreak response missions; 4) laboratory workers conducting research on NiV; and 5) military and other service personnel susceptible to the use of NiV as a biological weapon. While multi-dose vaccine regimens would be feasible for laboratory and healthcare workers and some military personnel in stable settings with defined risk, an outbreak setting or a case of deliberate release would require rapidly conferred protection with a single administration. Here we describe the protection of ferrets from NiVM-induced disease using single-injection rVSV vaccine vectors expressing the NiVB F and/or NiVB G proteins. To date, this is the first study to show efficacy of a vaccine against NiV using a single administration in the ferret model. Based on the success of this study, these vectors should be evaluated further in the African green monkey model against NiVB challenge as this strain appears to be the most pathogenic in humans .
Plasmid design and construction
RNA was isolated from NiVB virus stocks (NiVB #200401066 was obtained from a patient from the 2004 outbreak in Bangladesh (kindly provided by Dr. Thomas Ksiazek) using approved protocols at biosafety level 4 (BSL-4) in the Galveston National Laboratory (GNL) at the University of Texas Medical Branch (UTMB). The RNA was used to make cDNA with gene specific primers and the genes were amplified using gene specific primers (NiVB F or G) containing MluI and NheI restriction sites at the 5′ and 3′ ends respectively. The PCR amplified products and pΔG-VSV-2.6 plasmid were restriction digested with MluI and NheI and gel purified. Purified products and vector were ligated and positive colonies were screened and sequenced for positive constructs.
rVSV vaccine vectors and challenge virus
The rVSV NiVB vaccines (rVSV-ΔG-NiVB/F-GFP and rVSV-ΔG-NiVB/G-GFP) and rVSV-ΔG-GFP were recovered using methods previously described . The rVSVΔG viruses were propagated on BHK-21 cells transfected with 2 μg of pCAGGS-GInd expressing the VSV glycoprotein (GInd) and titered as previously described . Viruses complemented with VSV GInd are denoted as GInd* rVSV-ΔG-GFP, G*rVSV-ΔG-NiVB/F-GFP, and G* rVSV-ΔG-NiVB/G-GFP. To make the vaccine in Group 4 (Figure 1A), Vero cells were co-infected with G*rVSV-ΔG-NiVB/F-GFP and G* rVSV-ΔG-NiVB/G-GFP at MOI 5 for each virus. Supernatants were collected 24 h.p.i. and titered on BHK-21 cells complemented with VSV GInd.
NiVM #1999011924 was obtained from a patient from the 1999 outbreak in Malaysia (kindly provided by Dr. Thomas Ksiazek). NiVM was chosen for challenge in ferrets based on our lethality data with this particular stock at the time of the study. The virus was propagated on Vero E6 cells in Eagle’s minimal essential medium (EMEM) supplemented with 10% fetal calf serum. The NiVM challenge virus stock was assessed for the presence of endotoxin using The Endosafe®-Portable Test System (PTS) (Charles River, Wilmington, MA). Virus preparations were diluted 1:10 in Limulus Amebocyte Lysate (LAL) Reagent Water (LRW) per manufacturer’s directions and endotoxin levels were tested in LAL Endosafe®-PTS cartridges as directed by the manufacturer. Each preparation was found to be below detectable limits while positive controls showed that the tests were valid.
Conducting animal studies in BSL-4 severely restricts the number of animal subjects, the volume of biological samples that can be obtained and the ability to repeat assays independently and thus limit statistical analysis. Consequently, data are presented as the mean calculated from replicate samples, not replicate assays, and error bars represent the standard deviation across replicates.
Animal studies were performed in BSL-4 biocontainment at the GNL at the UTMB at Galveston and were approved by the UTMB Institutional Animal Care and Use Committee (IACUC). Animal research was conducted in compliance with the Animal Welfare Act and other Federal statutes and regulations relating to animals and experiments involving animals and adheres to the principles stated in the eighth edition of the Guide for the Care and Use of Laboratory Animals, National Research Council, 2013. The facility where this research was conducted is fully accredited by the Association for Assessment and Accreditation of Laboratory Animal Care International.
Twenty female ferrets weighing 0.75-1 kg were housed in groups of 3 and 2 animals per vaccine group. Before vaccination, subjects were anesthetized by i.m. injection with ketamine-acepromazine-xylazine (KAX) cocktail and had transponder chips (BioMedic Data Systems, Seaford, DE) implanted subcutaneously for animal identification and temperature monitoring. For procedures, animals were anesthetized with KAX and vaccinated with ~ 1 × 107 PFU by i.m. injection on day -28 (Figure 2A). Animals were inoculated intranasally (i.n.) with ~ 5 × 103 pfu of NiVM in 1 ml of Dulbecco’s minimal essential medium (DMEM) (Sigma-Aldrich, St Louis, MO) 28 days after vaccination (Figure 2A, *). Animals were anesthetized for clinical examination including temperature, respiration quality, blood collection, and on days 0, 6, and 21 p.c. Before and after challenge animals were assessed daily for weight, temperature, and scored on a scale of 0 of 9 for clinical observations based on coat appearance, social behavior, and provoked behavior; animals scoring 7 or greater were euthanized per IACUC protocol. Subjects in the vaccine cohorts were euthanized at the study endpoint on day 22 p.c. whereas the subjects in Group 1 had to be euthanized according to approved humane end points on day 7 or 8 p.c. All other subjects survived until the end of the study.
Measurement of serum or plasma NiV F and G specific antibodies
Ferret serum collected at indicated time points was tested for IgG antibodies against NiV F and G using previously developed multiplexed microsphere assays . 96-well filter plates were primed with PBS. Test sera were diluted in PBS at 1:10 for pre vaccination time points and 1:10,000 for time points after vaccination. Biotinylated goat anti-ferret IgG and streptavidin-phycoerythrin (strep-PE) were also diluted in PBS. Coupled microspheres (sG-HeV, sG-NiV, sF-Hev, sF-NiV) were prepared by sonication for 1 minute followed by vortex mixing for 1 minute each and then diluted in PBS. Priming liquid was removed from plates using a Bio-Plex Pro II Wash Station (Bio-Rad, Hercules, CA) and 100 μL containing 1500 of each coupled microsphere was added to each well. The microsphere mixture was removed by vacuum, 100 μL of diluted test sera was added to appropriate wells and incubated at room temperature (RT) for 30 minutes while shaking in the dark. Diluted test samples were removed by vacuum and 100 μL of diluted biotinylated goat anti-ferret (1:500) (Pierce, ThermoScientific, Rockford, IL) was added to each well and incubated as previously described above. Liquid was removed by vacuum and 100 μL of strep-PE (1:1000) (Qiagen, Valencia, CA) was added to each well and again incubated for 30 minutes. All liquid was removed from plates with a vacuum manifold and washed twice with 300 μL PBS, removing liquid between wash steps. Finally, 125 μL of PBS was added to each well and incubated for 2 minutes as described above. Samples were assayed for mean fluorescence intensity (MFI) across at least a 100 bead region performed on the BioPlex-200 machine and analyzed using Bio-Plex Manager Software (v 6.1) (Bio-Rad). MFI and the standard deviation (s.d.) of fluorescence intensity across 100 beads were determined for each sample and plotted.
NiVM serum neutralization assays
PRNTs were determined using a conventional serum neutralization assay. Briefly, sera were serially diluted twofold, and incubated with ~ 100 pfu of NiV for 1 hour at 37°C. Virus and antibodies were then added to individual wells of 6-well plates of confluent Vero cell monolayers. Plates were stained with neutral red 2 days after infection and plaques were counted 24 hours after staining. The 50% neutralization titer (PRNT50) was determined as the serum dilution at which there was a 50% reduction in plaque counts versus control wells.
Specimen collection and processing in NiV-infected ferrets
Blood was collected and placed in MiniCollect EDTA tubes or serum tubes (Greiner Bio One, Monroe, NC). Immediately following sampling, 100 μl of blood was added to 600 μl of AVL viral lysis buffer (Qiagen) for RNA extraction. For tissues, approximately 100 mg was stored in 1 ml RNAlater (Qiagen) for 7 days to stabilize RNA. RNAlater was completely removed, and tissues were homogenized in 600 μl RLT buffer (Qiagen) in a 2-ml cryovial using a tissue lyser (Qiagen) and stainless steel beads. The tissues sampled included right lung upper lobe, right lung middle lobe, right lung lower lobe, left lung upper lobe, left lung middle lobe, left lung lower lobe, liver, spleen, kidney, adrenal gland, pancreas, and brain (frontal cortex). All blood samples were inactivated in AVL viral lysis buffer, and tissue samples were homogenized and inactivated in RLT buffer prior to removal from the BSL-4 laboratory. Subsequently, RNA was isolated from blood and swabs using the QIAamp viral RNA kit (Qiagen) and from tissues using the RNeasy minikit (Qiagen) according to the manufacturer’s instructions supplied with each kit.
Hematology and serum biochemistry
Prior to the study, baseline blood and sera were collected via the anterior vena cava from all 20 ferrets. On days -28, 0, 6, and 21 blood was collected from all animals. Complete blood counts of total white blood cell counts, white blood cell differentials, red blood cell counts, platelet counts, hematocrit values, total hemoglobin concentrations, mean cell volumes, mean corpuscular volumes, and mean corpuscular hemoglobin concentrations were analyzed from blood collected in MiniCollect EDTA tubes (Greiner Bio One) using a Hemavet HV950FS instrument per manufacturer’s instructions (Drew Scientific, Oxford, CT). Serum analysis of blood chemistries was performed using a VetScan classic analyzer and comprehensive diagnostic profile rotors measuring of albumin (ALB), amylase, alanine aminotransferase (ALT), alkaline phosphatase (ALP), calcium, glucose, total protein, total bilirubin (TBIL), blood urea nitrogen (BUN), creatinine (CRE), phosphorus, sodium, and total protein (Abaxis, Union City, CA). All blood and serum samples were processed and analyzed immediately after collection.
Histopathology and immunohistochemistry
Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination and were immersion-fixed in 10% neutral buffered formalin for at least 21 days in BSL-4. Subsequently, formalin was changed; specimens were removed from BSL-4, processed in BSL-2 by conventional methods and embedded in paraffin and sectioned at 5 μm thickness. For immunohistochemistry, specific anti-NiV immunoreactivity was detected using an anti-NiV N protein rabbit primary antibody (kindly provided by Dr. Christopher Broder) at a 1:5000 dilution for 30 minutes. The tissue sections were processed for immunohistochemistry using the Dako Autostainer (Dako, Carpinteria, CA). Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories, Burlingame, CA) at 1:200 for 30 minutes followed by Dako LSAB2 streptavidin-HRP (Dako) for 15 minutes. Slides were developed with Dako DAB chromagen (Dako) for 5 minutes and counterstained with hematoxylin for one minute. Non-immune rabbit IgG was used as a negative staining control.
Detection of NiV load
RNA was isolated from blood or tissues and analyzed using primers/probe targeting the N gene and intergenic region between N and P of NiV for quantitative real-time PCR (qRT-PCR) with the probe used here being 6-carboxyfluorescein (6FAM)-5′ CGT CAC ACA TCA GCT CTG ACG A 3′-6 carboxytetramethylrhodamine (TAMRA) (Life Technologies, Carlsbad, CA). NiV RNA was detected using the CFX96 detection system (Bio-Rad) in One-step probe qRT-PCR kits (Qiagen) with the following cycle conditions: 50°C for 10 minutes, 95°C for 10 seconds, and 40 cycles of 95°C for 10 seconds and 59°C for 30 seconds. Threshold cycle (CT) values representing NiV genomes were analyzed with CFX Manager Software, and data are shown as genome equivalents (GEq). To create the GEq standard, RNA from NiV challenge stocks was extracted and the number of NiV genomes was calculated using Avogadro’s number and the molecular weight of the NiV genome. Virus titration was performed by plaque assay with Vero cells from all serum and control tissue samples. Briefly, increasing 10-fold dilutions of the samples were adsorbed to Vero cell monolayers in duplicate wells (200 μl); the limit of detection was 25 pfu/ml.
We thank Joan B. Geisbert and Daniel J. Deer for study support, Jessica Graber for expert technical assistance with the ABSL-2 and ABSL-4 sample collection during the vaccination and infection studies, and the staff of the UTMB Animal Resources Center for animal care. Opinions, interpretations, conclusions, and recommendations are those of the authors and are not necessarily endorsed by UTMB.
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