Skip to main content

Table 2 Norovirus GII classification in RdRp region and capsid region with the percentage of sequence identity from this study

From: An unusual diarrheal outbreak in the community in Eastern Thailand caused by Norovirus GII.3[P25]

Norovirus

Collection date

% Identity*

RdRp region

Capsid region

Accession no

PBH21022

29-Dec-21

98.9

GII.P25

GII.3

OQ300332

PBH21024

29-Dec-21

98.9

GII.P25

GII.3

OQ300333

PBH21028

26-Dec-21

98.3

GII.P25

GII.3

OQ300334

PBH22030

3-Jan-22

98.5

GII.P25

GII.3

OP954345

PBH22031

1-Jan-22

98.9

GII.P25

GII.3

OP954346

PBH22032

1-Jan-22

98.5

GII.P25

GII.3

OP954347

PBH22033

1-Jan-22

98.5

GII.P25

GII.3

OP954348

PBH22034

2-Jan-22

98.5

GII.P25

GII.3

OP954349

PBH22037

31-Dec-21

98.9

GII.P25

GII.3

OP954350

PBH22040

1-Jan-22

98.9

GII.P25

GII.3

OP954351

PBH22042

31-Dec-21

98.5

GII.P25

GII.3

OP954352

PBH22044

31-Dec-21

98.9

GII.P25

GII.3

OP954353

PBH22051

5-Jan-22

98.5

GII.P25

GII.3

OP954354

PBH22052

5-Jan-22

98.5

GII.P25

GII.3

OP954355

PBH22054

5-Jan-22

98.5

GII.P25

GII.3

OP954356

PBH22055

4-Jan-22

98.5

GII.P25

GII.3

OP954357

PBH22056

3-Jan-22

98.5

GII.P25

GII.3

OP954358

PBH22066

6-Jan-22

98.5

GII.P25

GII.3

OP954359

PBH22068

2-Jan-22

98.5

GII.P25

GII.3

OP954360

PBH22070

2-Jan-22

98.3

GII.P21(GII.Pb)

GII.21

OP954361

PBH22071

2-Jan-22

99.1

GII.P17

GII.17

OP954362

PBH22072

2-Jan-22

98.5

GII.P25

GII.3

OP954363

PBH22073

2-Jan-22

98.9

GII.P25

GII.3

OP954364

PBH22075

7-Jan-22

98.5

GII.P25

GII.3

OP954365

PBH22094

7-Jan-22

99.1

GII.P17

GII.17

OP954366

PBH22095

7-Jan-22

98.9

GII.P12**

GII.3

OP954367

PBH22096

11-Jan-22

98.9

GII.P25

GII.3

OP954368

PBH22108

13-Jan-22

98.5

GII.P25

GII.3

OP954369

PBH22139

21-Feb-22

98.7

GII.P16

GII.3

OP954370

PBH22211

27-Jul-22

98.5

GII.P31**

GII.4

OQ300335

PBH22247

12-Sep-22

97.9

GII.P31**

GII.4

OQ300336

  1. *The identity was compared with public sequence of each genotype: OL451532 (GII.3[P25]), MK396776 (GII.21[P21]), MT344182 (GII.17[P17]), LC621120 (GII.3[P12]), LC597117 (GII.3[P16]), MN294766 (GII.4[P31])
  2. **Norovirus typing was classified using the Human Calicivirus Typing tool [19]. These three samples were unassignable by the Norovirus Typing Toll Version 2 [18]