Table 3 Homology analysis of NS5A nucleotide sequence within clades or subclades (%)
Identity /Divergence | 1.2 | 1.4 | 1.5 | 1.6 | 1.7 | 2.1 | 2.2 | 2.3 | 3 |
|---|---|---|---|---|---|---|---|---|---|
1.2 | 97.7 /2.3 | 89.1–89.3 | 88.7–89.3 | 87.6–88.1 | 85-85.3 | 79.2–80.9 | 81-81.1 | 80.4–80.6 | 79.7–80.2 |
1.4 | 10.7–10.9 | 98.4–99 /1-1.6 | 88.9–90 | 88.1–88.3 | 84.9–85.6 | 79.3–80.6 | 80.6 | 80.4–80.6 | 79.1–79.9 |
1.5 | 10.7–11.3 | 10-11.1 | 97.5–99 /1-2.5 | 86.8–87.6 | 84.7–86.7 | 78.7–80.2 | 79.3–80.7 | 79.1–80 | 78.7–79.7 |
1.6 | 11.9–12.4 | 11.7–11.9 | 22.4–23.2 | 100 /0 | 84.7–85 | 79-79.7 | 79.3 | 80 | 78.7–79.4 |
1.7 | 14.7–15 | 14.4–15.1 | 23.3–25.3 | 15-15.3 | 97.8–100 /0-2.2 | 78.9–80.5 | 79.2–79.4 | 79.3–80.1 | 77.1–78.7 |
2.1 | 19.1–20.8 | 19.4–21.3 | 19.8–21.3 | 20.3–21 | 19.5–21.1 | 94.6–99.9 /0.1–5.4 | 93.6–94.5 | 92.4–93.3 | 76.8–77.9 |
2.2 | 18.9–19 | 19.4 | 19.3–20.7 | 20.7 | 20.6–20.8 | 5.5–6.4 | 100 /0 | 92.7 | 77.5–77.9 |
2.3 | 19.4–19.6 | 19.4–19.6 | 20-20.9 | 20 | 19.9–20.7 | 6.7–7.6 | 7.3 | 100 /0 | 77.6–78.3 |
3 | 19.8–20.3 | 20.1–20.9 | 20.3–21.3 | 20.6–21.3 | 21.3–22.9 | 22.1–23.2 | 22.1–22.5 | 21.7–22.4 | 98.2–99.8 /0.2–1.8 |