Table 3 Recombination events identified by recombination detection program 4 (RDP4).
Breakpoint position in recombinant sequence | Parental sequence | Av.P-Val for the six detection methods in RDP | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Recombinant segment | Begin | End | Major | Minor | GENECONV | BootScan | MaxChi | Chimaera | SiSCAN | 3Seq |
ORF1b | 18,360 | 19,622 | BJ-2011-1 | CH_hubei_2016 | 1.730 × 10− 06 | 9.584 × 10− 14 | 1.577 × 10− 04 | 9.879 × 10− 03 | 8.567 × 10− 03 | 6.042 × 10− 09 |