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Table 3 Time course measurement of log2 fold change (LFC) in PAL1 expression in ASM- and water-treated Kaleso and Kalawe plants

From: PAL1 gene of the phenylpropanoid pathway increases resistance to the Cassava brown streak virus in cassava

Sample type

LFC of PAL1 in RNAi-silenced plants at 0.3–28 days post agro-infiltration:

LFC of CBSV abundance at 14–28 dai of treated plants:

0.3

1

2

7

14

21

28

14

21

28

Kaleso ASM CBSV

2.4

4.8

4.7

4.6

6.3

3.5

5.6

ND

ND

ND

Kaleso ASM Mock

3.7

3.3

7.3

5.3

5.9

7.0

5.8

ND

ND

ND

Kaleso water CBSV

0.7

0.6

1.5

1.5

3.3

0.3

− 0.9

ND

ND

ND

Kaleso water Mock

− 2.6

0.8

0.4

0.4

− 0.9

1.1

− 3.2

ND

ND

ND

Kalawe ASM CBSV

2.0

3.4

0.1

− 1.6

2.6

2.8

2.4

ND

− 10.4

− 15.4

Kalawe ASM Mock

− 6.1

− 6.4

− 5.0

− 5.9

− 2.8

− 1.5

− 1.6

ND

ND

ND

Kalawe water CBSV

− 0.6

− 1.3

− 2.4

− 4.1

− 2.3

− 0.4

− 2.6

− 1.0

− 4.7

1.1

Kalawe water Mock

0.2

− 6.3

− 5.0

− 9.4

− 5.0

− 6.4

− 5.1

ND

ND

ND

  1. Not detectable virus quantities are marked as ND