Fig. 1
From: Detection of alpha- and betacoronaviruses in rodents from Yunnan, China
Phylogenetic analysis of detected rodent CoVs with representative CoVs based on 440-bp partial RdRp sequences. The tree was constructed by the maximum-likelihood method with 1000 bootstrap replicates. Bootstrap values above 50% were shown. Rodent CoVs found in this study are shown in bold. CoV abbreviations: bat SL-CoV WIV1, bat SARS-like coronavirus WIV1; BCoV, bovine coronavirus; CCoV, canine coronavirus; CrCoV, canine respiratory coronavirus; ECoV, equine coronavirus; FCoV, feline coronavirus; HCoV 229E, human coronavirus 229E; HCoV HKU1, human coronavirus HKU1; HCoV NL63, human coronavirus NL63; HCoV OC43, human coronavirus OC43; IBV, infectious bronchitis virus; MERS-CoV, MERS coronavirus; MHV, murine hepatitis virus; PHEV, porcine hemagglutinating encephalomyelitis virus; SARS-CoV, SARS coronavirus; TGEV, transmissible gastroenteritis virus