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Table 1 The Chilean infectious pancreatic necrosis virus isolates were obtained from different geographical regions and salmonid species. Additionally, the tissue, stage, weight, water source, and year of the isolate are reported

From: Molecular characterization of infectious pancreatic necrosis virus strains isolated from the three types of salmonids farmed in Chile

Isolate code

Tissue used for isolation

Geographical areaa

Species

Stage

Water source

Year

Accession number

1096-BC1

Mix (kidney, liver, spleen)

Aysén R. (XI Region)

O. kisutch

Juvenile

NA

2009

KX523824

1096-BC2

Mix (kidney, liver, spleen)

Comau Fjord (X Region)

S. salar

Juvenile

Freshwater

2010

KX523802

1096-BC3

Mix (whole fish)

Maule R. (VII Region)

S. salar

Alevin

Freshwater

2009

KX523827

1096-BC4

Mix (kidney, liver, spleen)

Comau Fjord (X Region)

S. salar

Alevin

Freshwater

2010

KX523803

1096-BC5

Mix (kidney, liver, spleen)

Aysén R. (XI Region)

O. kisutch

Juvenile

NA

2009

KX523816

1096-BC6

Mix (kidney, liver, spleen)

Los Angeles (VIII Region)

O. mykiss

Alevin

Freshwater

2009

KX523804

1096-BC7

Mix (kidney, liver, spleen)

Comau Fjord (X Region)

O. mykiss

Juvenile

Freshwater

2010

KX523818

1096-BC8

Mix (kidney, liver, spleen)

Rupanco Lake (X region)

O. mykiss

Juvenile

Freshwater

2010

KX523828

1096-BC9

Mix (kidney, liver, spleen)

Reloncaví Cove (X Region)

S. salar

Adult

Freshwater

2010

KX523829

1096-BC10

Mix (kidney, liver, spleen)

Rupanco Lake (X region)

O. mykiss

Juvenile

Freshwater

2010

KX523801

1096-BC11

Mix (kidney, liver, spleen)

Cisnes (XI Region)

S. salar

NA

Seawater

2010

KX523819

1096-BC12

Mix (kidney, liver, spleen)

Calbuco (X Region)

S. salar

Alevine

Freshwater

2010

KX523800

1096-BC13

Mix (kidney, liver, spleen)

Reloncaví Estuary (X Region)

S. salar

Adult

Estuary

2010

KX523833

1096-BC14

Mix (kidney, liver, spleen)

Comau Fjord (X Region)

S. salar

Alevine

Freshwater

2010

KX523821

1096-BC15

Mix (kidney, liver, spleen)

Reloncaví Estuary (X Region)

S. salar

Adult

Estuary

2010

KX523830

1096-BC16

Mix (kidney, liver, spleen)

Cisnes (XI Region)

S. salar

Smolt

Seawater

2010

KX523805

1096-BC17

Mix (kidney, liver, spleen)

Nehuentue (VIII Region)

S. salar

Alevin

Freshwater

2011

KX523822

1096-BC18

Mix (kidney, liver, spleen)

Calbuco (X Region)

S. salar

Alevin

Freshwater

2010

KX523820

1096-V1

Mix (whole fish)

Araucanía R. (IX Region)

O. mykiss

Alevin

Freshwater

2006

KX523809

1096-V2

Mix (kidney/spleen)

Magallanes R. (XII Region)

S. salar

Pre-smolt

Freshwater

2009

KX523810

1096-V3

Mix (kidney/spleen)

Magallanes R. (XII Region)

S. salar

Pre-smolt

Freshwater

2009

KX523811

1096-V4

Mix (kidney/spleen)

Los Ríos R. (XIV Region)

O. kisutch

Pre-smolt

Estuary

2008

KX523799

1096-V5

Mix (kidney/spleen)

Los Ríos R. (XIV Region)

S. salar

Smolt

Estuary

2008

KX523807

1096-V6

Mix (kidney/spleen)

Los Lagos R. (X Region)

O. mykiss

Smolt

Freshwater

2006

KX523808

1096-V7

Mix (whole fish)

Los Lagos R. (X Region)

O. mykiss

Alevin

Freshwater

2006

KX523825

1096-V8

Mix (kidney/spleen)

Los Ríos R. (XIV Region)

O. mykiss

Pre-smolt

Estuary

2007

KX523806

1096-V9

Mix (kidney/spleen)

Los Lagos R. (X Region)

S. salar

Pre-smolt

Estuary

2006

KX523826

1096-V10

Mix (kidney/spleen)

Los Lagos R. (X Region)

S. salar

Alevin

Freshwater

2006

KX523823

1096-BC20

Mix (kidney, liver, spleen)

Aysén R. (XI Region)

S. salar

NA

NA

2009

KX523817

1096-BC21

Mix (kidney, liver, spleen)

Araucanía R. (IX Region)

O. kisutch

Alevin

Freshwater

2009

KX523813

1096-BC22

Mix (kidney, liver, spleen)

Aysén R. (XI Region)

S. salar

Adult

Seawater

2009

KX523812

1096-BC23

Mix (kidney, liver, spleen)

Aysén R. (XI Region)

O. kisutch

Juvenile

Freshwater

2009

KX523815

1096-BC24

Mix (kidney, liver, spleen)

Aysén R. (XI Region)

O. kisutch

Alevin

Freshwater

2009

KX523814

1096-BC25

Mix (kidney, liver, caeca)

Los Ríos R. (XIV Region)

S. salar

Alevin

Freshwater

2010

KX523832

1096-BC26

Mix (kidney, liver, caeca)

Araucanía R. (IX Region)

O. kisutch

Alevin

Freshwater

2009

KX523831

1096-BC27

NA

NA

NA

NA

NA

2010

KX523834

  1. NA: Not available. aChile is geopolitically dived from north to south into 15 distinct regions equally recognized by Roman numerals or written names. The regions included in this study are as follows: VII = Maule Region; VIII = Biobío Region; IX = Araucanía Region; X = Los Lagos Region; XI = Aysén Region; XII = Magallanes Region; and XIV = Los Ríos Region