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Table 1 Information of selected sequences

From: Analysis of HIV-1 intersubtype recombination breakpoints suggests region with high pairing probability may be a more fundamental factor than sequence similarity affecting HIV-1 recombination

Geographic regions

No. of collected sequences (Closing date)

No. of jpHMM-indicated recombinant sequences

No. of total breakpoints

Average breakpoints per genome

URFs-Africa

145 (March 20, 2014)

141

859

6.1

URFs-Asia

130 (March 16, 2014)

128

578

4.5

URFs-Europe

63 (March 17, 2014)

59

377

6.4

CRFs-global

59 (March 17, 2014)

57

323

5.7