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Table 1 Measles virus complete genome sequences used in sequence analyses

From: Common position of indels that cause deviations from canonical genome organization in different measles virus strains

Strain name

Acc. no.

Genotype

Edmonston (AIK-C vaccine)a

AF266286

A

Edmonston (Moraten vaccine)a, b

AF266287

A

Edmonston (Zagreb vaccine)a

AF266290

A

Edmonston (Schwarz vaccine)a, b

AF266291

A

Edmonston Enders (Morten)a, b

FJ211583

A

Schwarz master seed (MEV10016)a, b

FJ211589

A

Schwarz lot AMJRB107Ba, b

FJ211590

A

Schwarz FF-8a

AB591381

A

Edmonston wild-type straina

AF266288

A

Edmonston (Rubeovax vaccine)a

AF266289

A

Edmonston Zagreb master seeda, c

AY486083

A

Edmonston Zagreb working seeda, c

AY486084

A

Edmonston a, NC

K01711

A

Changchun-47d

EF033071

A

Changchun-47d

FJ416068

A

Leningrad-4

AY730614

A

Leningrad-16 master seede

JF727649

A

Leningrad-16 final vaccinee

JF727650

A

CAM-70 vaccine lot2f

DQ345721

A

CAM-70 vaccine lot1f

DQ345722

A

CAM-70 10pCEFf

DQ345723

A

Shanghai-191

EU435017

A

Shanghai-191

FJ416067

A

KS

HM439386

B3

MVi/New Jersey.USA/45.05

JN635408

B3

Ichinose-B95a

NC_001498

D3

D-V/Sg

EU293548

D3

D-CEF

EU293549

D3

Davis87g

EU293550

D3

D-VI

EU293551

D3

D-VII

EU293552

D3

T11wild

AB481087

D3

T11Ve-23

AB481088

D3

MVi/California.USA/8.04

JN635409

D3

MVi/Tokyo.JPN/37.99(Y) NC

GQ376026

D3

MVi/Tokyo.JPN/37.99(Y)C7 NC

GQ376027

D3

SSPE-Kobe-1h, NC

AB254456

D3

SIh

JF791787

pending

MVi/Treviso.ITA/03.10/1[D4] NC

KC164757

D4

MVi/New York.USA/26.09/3 NC

JN635402

D4

MVi/Florida.USA/19.09 NC

JN635403

D4

MVi/Washington.USA/18.08/1

JN635405

D5

MVi/Arizona.USA/11.08/2

JN635406

D5

MVs/Zagreb.CRO/47.02/[D6] SSPE h, NC

DQ227318

D6

97-45881 NC

DQ227319

D6

MVs/Zagreb.CRO/08.03/ SSPE h, NC

DQ227320

D6

WA.USA/17.98 NC

DQ227321

D6

MVi/California.USA/16.03

JN635410

D7

MVi/Virginia.USA/15.09

JN635404

D8

MVi/Texas.USA/4.07

JN635407

D8

MVi/Muenchen.DEU/19.13[D8]

KJ410048

D8

MVi/Venice.ITA/06.11/1[G3]

KC164758

G3

MVi/Pennsylvania.USA/20.09

JN635411

H1

IMB-1

FJ161211

H1

MVi/Zhejiang.CHN/7.05/4

DQ211902

H1

MVi/Zhejiang.CHN/10.05/1[H1]

KJ755976

H1

MVi/Zhejiang.CHN/12.09/1[H1]

KJ755980

H1

MVi/Zhejiang.CHN/10.11/2[H1]

KJ755982

H1

MVi/Zhejiang.CHN/16.10/2[H1]

KJ755981

H1

MVi/Zhejiang.CHN/12.08/1[H1]

KJ755979

H1

MVi/Zhejiang.CHN/14.07/1[H1]

KJ755978

H1

MVi/Zhejiang.CHN/12.06/2[H1]

KJ755977

H1

MVi/Zhejiang.CHN/02/2[H1]

KJ755975

H1

MVi/Zhejiang.CHN/99/2[H1]

KJ755974

H1

  1. astrains belonging to Edmonston lineage
  2. bidentical sequences
  3. cidentical sequences
  4. didentical sequences
  5. eidentical sequences
  6. fidentical sequences
  7. gidentical sequences
  8. hstrains isolated from patients with subacute sclerosing panencephalitis
  9. NCstrains showing deviations from canonical genome organization
  10. Non-canonical strains are indicated in bold