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Table 2 Nucleotide and amino acid sequence similarity (%) between FUGV virus and representative hantaviruses (23 ICTV-nominated species and two closely related viruses LX309 and YN06-862)

From: Fugong virus, a novel hantavirus harbored by the small oriental vole (Eothenomys eleusis) in China

 

nt and aa identities (%)

 

S segment

M segment

L segment

Virus species (strain)

1813 nt

435 aa

3636 nt

1139 aa

6531 nt

2152 aa

Hantavirus LX309

63.1

88.8

75.7

84.7

76.3

87.3

Hantavirus YN06-862

91.1

99

-

-

-

-

Andes virus Chile-9717869

51.9

77.9

63.1

65.6

71.6

78

Bayou virus F0260003

53.4

78.3

62.2

64.5

70.8

77.7

Black Creek Canal virus

54

72.3

62.7

65.4

71.2

77.4

Cano Delgadito virus VHV-574

53.5

72.8

61.3

62.9

71.4

78.1

Dobrava-Belgrade virus Afl9/1999

45.3

60.9

56.9

54.6

66

68.8

El Moro Canyon virus RM-97

52.2

75.6

60.0

66.3

-

-

Hantaan virus 76–118

43.7

62.7

57.2

55.2

66.3

67.9

Isla Vista virus MC-SB-1

51.7

79

-

-

-

-

Khabarovsk virus Fuyuan-Mm-312

51.6

75.1

66.5

71

72.6

79.5

Laguna Negra virus 510B

52.6

75.8

62.5

64.9

-

-

Muleshoe virus SH-Tx-339

54.4

77.4

-

-

-

-

New York virus NY-2

53

74.9

62.9

65.6

-

-

Prospect Hill virus PH-1

50.9

77.4

67.5

71.5

70.6

79.5

Puumala virus Sotkamo

50.8

74

66.5

69.8

72.2

79.3

Rio Mamore virus HTN-007

52.6

77

63.2

65.6

70.9

78.3

Rio Segundo virus RMx-Costa-1

51.9

75.1

-

-

-

-

Saaremaa virus Saaremaa-160v

44.7

60.4

-

-

66.1

69.1

Sangassou virus SA14

44.8

61.6

56.6

53.8

66.6

67.8

Seoul virus 80–39

44.8

62.7

56.3

53.6

66.3

67.8

Sin Nombre virus NM H10

52.3

75.1

63.1

65.9

71.6

77.8

Thailand virus Anjozorobe

45.9

61.6

55.3

53.5

66

68.3

Thottapalayam virus VRC 66412

41.5

45.3

51.1

41.5

61.9

61.5

Topografov virus Ls136V

53.4

74.4

65

71.3

-

-

Tula virus Moravia/5302v/95

51.3

77

67.5

71.5

72.5

80

  1. IFA, immunofluorescence analysis; RT-PCR, reverse transcription PCR