Tissue | Number of runs | Total no. reads | Average length (nt) | Average quality |
---|
Mock
a
| 1 | 222,558 | 99.4 | 27.8 |
Symptomatic
b
| 5 | 865,103 | 98.6 | 28.1 |
Recovered
c
| 3 | 750,906 | 101.7 | 27.5 |
Total
|
9
|
1,838,567
| 99.8 | Â |
- a Pool of mock-inoculated leaf tissue sampled at 9, 15 and 20 dpi.
- b Pool of symptomatic leaf tissue sampled at 9 dpi. A single run had low quality sequences and thus was discarded from downstream analyses. A total of 770,694 sequences from a total of 4 runs were used in downstream analyses of symptomatic tissues.
- c Pool of recovered leaf tissue sampled at 20 dpi.