Table 1 List of sequences used in the phylogenetic analysis of Malaysian FCOVs isolates
From: Isolation and molecular characterization of type I and type II feline coronavirus in Malaysia
Isolate/ Strain | Accession No. | Country | Nucleotide position used |
|---|---|---|---|
UPM2C/07 | HQ206644 | Malaysia | 1-224 |
UPM5C/08 | HQ206645 | Malaysia | 1-224 |
UPM11C/08 | HM628778 | Malaysia | 1-221 |
UPM13C/08 | HQ206646 | Malaysia | 1-224 |
UPM8Ca/08 | JF757239 | Malaysia | 1-199 |
UPM14C/09 | HQ829849 | Malaysia | 1-224 |
UPM22C/09 | HQ829850 | Malaysia | 1-224 |
UPM24C/09 | HQ206647 | Malaysia | 1-224 |
UPM25C/09 | HQ206648 | Malaysia | 1-224 |
UPM26C/09 | HQ206649 | Malaysia | 1-221 |
UPM27C/09 | HQ206650 | Malaysia | 1-224 |
UPM28C/09 | HQ206651 | Malaysia | 1-224 |
UPM35C/10 | HQ829851 | Malaysia | 1-224 |
FCoV Black | EU186072 | USA | 24623-24846 |
FCoV UU19 | HQ392470 | Netherlands | 24610-24830 |
FCoV RM | FJ938051 | USA | 24572-24792 |
FCoV UU31 | HQ012371 | Netherlands | 24613-24833 |
FCoV UU10 | FJ938059 | Netherlands | 24626-24849 |
FIPV UCD11a | FJ917519 | USA | 4290-4513 |
FCoV UU8 | FJ938055 | Netherlands | 24613-24836 |
FCoV UU4 | FJ938054 | Netherlands | 24620-24843 |
FCoV UU7 | FJ938053 | Netherlands | 24620-24843 |
FCoV/NTU2 | DQ160294 | Taiwan | 4294-4517 |
FCoV UU34 | HQ012372 | Netherlands | 24562-24785 |
FCoV/S/3b | AB535528 | Japan | 3568-3791 |
FIPV UCD13 | FJ917523 | USA | 4316-4539 |
FCoV C1Je | DQ848678 | UK | 24616-24839 |
FECV UCD5 | FJ917522 | USA | 4316-4539 |
FIPV 79-1146 | DQ010921 | USA | 24507-24691 |
FIPV DF2 | DQ286389 | USA | 24737-24921 |
FIPVE2 | X06170 | Italy | 4371- 4500 |