Phylogenetic exploration of hantaviruses in paraguay reveals reassortment and host switching in South America

Table 1 Amino acid sequence similarity of S and M segment among hantaviruses identified in Paraguay and nearby countries

	LAN	RIO M	ALPA	JAB	JAB Akmo 006	AAI	AND	BMJ-NEB	IP37	JUQV Olfo 777	JUQ	PRG	ARA
LAN	-	96	94	92	90	94	94	94	94	94	94	94	NA
RIOM	93	--	94	92	90	92	94	94	94	94	94	93	NA
ALPA	92	96	--	94	94	95	94	94	96	96	96	95	NA
JAB	85	89	88	--	97	94	93	93	94	94	95	95	NA
JAB Akmo 006	86	88	88	99	--	94	93	93	94	94	95	95	NA
AAI	88	90	90	99	99	-	95	95	96	96	96	96	NA
AND	90	90	89	86	86	88	-	98	98	96	96	95	NA
BMJ-NEB	89	90	88	86	85	88	98	-	98	97	98	98	NA
IP37	90	90	89	86	86	88	96	95	-	99	99	98	NA
JUQ Olfo 777	89	88	87	86	86	87	96	94	100	-	99	99	NA
JUQ	90	90	89	86	85	88	96	95	100	100	-	97	NA
PRG	90	90	89	85	84	87	96	95	93	92	93	-	NA
ARA	91	91	90	90	89	90	96	94	94	94	94	96	-

ISSN: 1743-422X