Skip to main content

Table 2 Reaction conditions and assay performance of the five duplex real-time PCRs

From: A novel synthetic quantification standard including virus and internal report targets: application for the detection and quantification of emerging begomoviruses on tomato

Target

Virus

Internal report (ADN 25S)

T°m (°C)

Linear dynamic range

(copies/uL)

PCR efficiency (%)

 

Primers

Probe

Primers

Probe

 

Virus

Internal report

Virus

Internal report

TYLCV-IL

650

150

500

100

63

2 × 109 to 2 × 103

2 × 107to 2 × 103

96

108

TYLCV-Mld

250

200

750

150

64

2 × 109to2 × 103

2 × 109to2 × 103

103

107

PYMV-A

750

150

200

50

63

2 × 108to2 × 103

2 × 107to2 × 103

93

100

PYMV-B

900

150

200

50

63

2 × 109to2 × 103

2 × 109to2 × 103

97

100

ToLCKMV-like

750

150

300

50

62

2 × 108to2 × 103

2 × 107to2 × 103

95

104