From: Different rates of (non-)synonymous mutations in astrovirus genes; correlation with gene function
Species | ORF1a | ORF1b | ORF2 | |||||||
---|---|---|---|---|---|---|---|---|---|---|
TipBranche | AccNum | dN | dS | dN/dS | dN | dS | dN/dS | dN | dS | dN/dS |
Human1 | Z25771 | 0.0040 | 0.0445 | 0.0899 | 0.0026 | 0.0775 | 0.0335 | 0.0049 | 0.0503 | 0.0974 |
Human1 | L23513 | 0.0031 | 0.0228 | 0.1360 | 0.0000 | 0.0130 | 0.0000 | 0.0057 | 0.0386 | 0.1477 |
Human2 | L13745 | 0.0047 | 0.0514 | 0.0914 | 0.0086 | 0.1326 | 0.0649 | 0.1334 | 0.8681 | 0.1537 |
Human3 | AF141381 | 0.0085 | 0.2177 | 0.0390 | 0.0143 | 0.3686 | 0.0388 | 0.0415 | 0.5710 | 0.0727 |
Human4 | DQ070852 | 0.0068 | 0.2338 | 0.0291 | 0.0033 | 0.1517 | 0.0218 | 0.1564 | 0.5992 | 0.2610 |
Human5 | DQ028633 | 0.0122 | 0.1390 | 0.0878 | 0.0061 | 0.1872 | 0.0326 | 0.0959 | 0.7401 | 0.1296 |
Human6 | Z46658 | Â | Â | Â | Â | Â | Â | 0.0876 | 0.7478 | 0.1171 |
Human7 | Y08632 | Â | Â | Â | Â | Â | Â | 0.0582 | 0.5862 | 0.0993 |
Human8 | AF260508 | 0.0075 | 0.1508 | 0.0497 | 0.0033 | 0.1802 | 0.0183 | 0.0536 | 0.4412 | 0.1215 |
Sheep | Y15937 | 0.3386 | 28.9094 | 0.0117 | 0.1369 | 8.2335 | 0.0166 | 0.2367 | 46.6085 | 0.0051 |
Mink | AY179509 | 0.2348 | 24.9745 | 0.0094 | 0.1357 | 32.7666 | 0.0041 | 0.2994 | 28.4143 | 0.0105 |
Cat | AF056197 | Â | Â | Â | Â | Â | Â | 0.1262 | 0.6628 | 0.1904 |
Pig | AB037272 | Â | Â | Â | Â | Â | Â | 0.2204 | 28.9632 | 0.0076 |
Turkey1 | Y15936 | 0.3483 | 37.4061 | 0.0093 | 0.2029 | 18.8746 | 0.0107 | 0.1717 | 30.1582 | 0.0057 |
Turkey2 | AF206663 | 0.2821 | 11.8241 | 0.0239 | 0.1604 | 11.5272 | 0.0139 | 0.3652 | 20.9202 | 0.0175 |
ANV | AB033998 | 0.3863 | 25.2068 | 0.0153 | 0.1692 | 41.9092 | 0.0040 | 0.1007 | 1.3416 | 0.0751 |
ANV2 | AB046864 | 0.1208 | 1.0567 | 0.1143 | Â | Â | Â | Â | Â | Â |