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Figure 4 | Virology Journal

Figure 4

From: Molecular biodiversity of cassava begomoviruses in Tanzania: evolution of cassava geminiviruses in Africa and evidence for East Africa being a center of diversity of cassava geminiviruses

Figure 4

Phylogenetic tree (1000 bootstrap replications) obtained from comparison of the complete nucleotide sequence of EACMCV-[TZ1] DNA-B, partial B component sequences from Tanzania (TZBx) and available cassava mosaic geminivirus DNA-B component sequences. Tomato golden mosaic virus (TGMV-YV) (K02030) was used as the out-group. Abbreviations and accession numbers are: ACMV-[CI], African cassava mosaic virus-[Côte d'Ivoire] (AF259895); ACMV-[NG/Ogo], African cassava mosaic virus-[Nigeria-Ogo] (AJ427911); ACMV-[CM/KT], African cassava mosaic virus-[Cameroon KT] (AY211886); ACMV-[CM], African cassava mosaic virus-[Cameroon] (AF112353); ACMV-[KE], African cassava mosaic virus-[Kenya] (J02058); ACMV-[NG], African cassava mosaic virus-[Nigeria] (X17096); ACMV-UGMld, African cassava mosaic virus-Uganda mild (AF126801); ACMV-UGSvr, African cassava mosaic virus-Uganda severe (AF126803); EACMCV-[CM], East African cassava mosaic Cameroon virus-[Cameroon] (AF112355); EACMCV-[CI], East African cassava mosaic Cameroon virus-[Côte d'Ivoire] (AF259897); EACMV-UG3Mld, East African cassava mosaic virus-Uganda3 mild (AF126805); EACMV-UG3Svr, East African cassava mosaic virus-Uganda3 severe (AF126807); EACMZV-[KE/Kil], East African cassava mosaic Zanzibar virus-[Kenya -Kil] (AJ628732); EACMZV-[ZB], East African cassava mosaic Zanzibar Virus – [Zanzibar] (AF422175); ICMV-[Kat], Indian cassava mosaic virus – [Kattukuda] (AJ575821); ICMV-[Ker], Indian cassava mosaic virus – [Kerala] (AJ575823); ICMV-[Mah], Indian cassava mosaic virus – [Maharashstra] (AJ314740); ICMV-[Mah2], Indian cassava mosaic virus – [Maharashstra 2] (AY730036); ICMV-[Tri], Indian cassava mosaic virus – [Trivandrum] (Z24759); SACMV-[ZA], South African cassava mosaic virus – [South Africa] (AF155807); SLCMV-[Adi], Sri-Lankan cassava mosaic virus-[Adivaram] (AJ579308); SLCMV-[Col], Sri-Lankan cassava mosaic virus-[Colombo] (AF314738).

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