Table 4 Comparison of nucleotide and deduced amino acid sequences of M genes between 19 Chinese PToVs and reference PToV (GenBank accession No. GU181244)

District

Name

Nucleotide substitutions

1

1

2

3

7

9

1

1

1

1

1

2

2

2

2

3

3

4

4

4

4

4

4

4

5

5

7

8

7

9

2

3

1

2

2

5

7

2

2

7

8

0

8

0

2

3

4

4

4

9

1

1

1

1

3

1

2

2

8

6

8

6

4

8

3

2

1

2

7

5

2

3

Meishan

SC-2011-A1

T

T

C

A

A

C

-

C

T

C

-

T

-

T

G

C

C

-

C

-

-

C

-

T

G

C

SC-2011-A2

T

T

C

A

A

C

C

C

T

C

T

T

-

T

G

C

C

-

C

-

-

C

-

T

G

C

Mianyang

SC-2011-B1

T

T

C

A

A

C

C

C

C

C

T

T

-

T

G

C

C

-

C

-

-

C

-

T

G

C

SC-2011-B2

T

T

C

A

A

C

C

C

T

C

T

T

-

T

G

C

C

-

C

-

-

C

-

T

G

C

Dazhou

SC-2011-E

T

T

C

A

A

C

C

C

T

C

T

T

-

T

G

C

C

-

C

-

-

C

-

T

G

C

Ziyang

SC-2011-F

T

T

C

A

A

C

C

C

T

C

T

T

C

T

G

C

C

-

C

-

-

C

-

T

G

C

Chengdu

SC-2012-C1

T

T

C

A

A

-

C

C

T

-

T

T

-

T

G

C

C

-

C

-

-

C

-

T

G

C

SC-2012-C2

T

T

C

A

A

C

C

C

T

-

T

T

C

T

G

C

C

-

C

-

-

C

-

T

G

C

Deyang

SC-2012-D1

T

T

C

A

A

C

C

C

C

C

-

T

C

T

G

C

C

T

-

-

-

C

-

T

G

C

SC-2012-D2

T

T

C

A

A

C

C

C

C

C

-

T

C

T

G

C

C

T

-

-

-

C

-

T

G

C

Suining

SC-2012-G

T

T

C

A

A

C

C

C

C

C

-

T

C

T

G

C

C

T

-

-

-

C

-

T

G

C

Zigong

SC-2012-J

T

T

C

A

A

C

C

C

C

C

T

-

-

T

G

C

-

T

C

-

-

C

-

T

G

C

Luzhou

SC-2012-K

T

T

C

A

A

C

C

C

T

C

T

-

-

T

G

C

-

T

C

T

A

C

T

T

G

C

Yibin

SC-2012-H1

T

T

C

A

A

C

-

C

T

C

-

-

-

T

G

C

-

-

-

T

-

C

-

T

G

C

SC-2012-H2

T

T

C

A

A

C

-

C

T

C

-

-

-

T

G

C

-

-

C

T

-

C

-

T

G

C

Ya’an

SC-2012-L1

T

T

C

A

A

-

C

C

C

C

-

T

-

T

G

C

-

T

C

-

A

C

T

T

G

C

SC-2012-L2

T

T

C

A

A

C

C

C

C

C

-

T

-

T

G

C

-

T

C

-

A

C

T

T

G

C

Leshan

SC-2013-I1

T

T

C

A

A

C

-

C

T

C

T

-

-

T

G

C

-

-

C

T

-

C

-

T

G

C

SC-2013-I2

T

T

C

A

A

C

-

C

T

C

T

-

-

T

G

C

-

-

C

T

-

C

-

T

G

C

Korea

GU181244

A

C

T

T

G

T

T

T

G

T

C

T

T

C

A

T

T

A

T

G

G

T

C

C

A

T

District

Name

Nucleotide substitutions

5

5

5

5

5

5

5

5

5

5

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

2

3

3

5

6

6

7

8

8

9

0

0

1

1

1

3

3

3

5

5

5

6

6

7

9

8

1

7

2

0

1

9

3

5

4

3

6

2

5

8

3

6

9

2

4

7

3

6

8

0

Meishan

SC-2011-A1

-

-

C

T

G

T

T

-

-

-

C

-

G

-

T

T

A

T

T

G

G

C

T

G

T

SC-2011-A2

-

-

C

T

G

T

T

-

-

-

C

-

G

-

T

T

A

T

T

G

G

C

T

G

T

Mianyang

SC-2011-B1

-

-

C

T

G

T

T

C

G

-

C

C

G

-

T

T

A

T

T

G

G

C

T

G

T

SC-2011-B2

-

-

C

T

G

T

T

C

G

-

-

C

G

-

T

T

A

T

T

G

G

C

T

G

T

Dazhou

SC-2011-E

T

C

C

T

G

T

T

-

-

-

C

-

G

-

T

T

A

T

T

G

G

C

T

G

T

Ziyang

SC-2011-F

-

-

C

T

G

T

T

C

G

-

C

-

A

T

T

T

A

T

T

G

G

C

T

G

T

Chengdu

SC-2012-C1

-

-

C

T

G

T

T

C

G

-

C

-

A

T

T

T

A

T

T

G

G

C

T

G

T

SC-2012-C2

-

-

C

T

G

T

T

C

G

-

C

-

A

T

T

T

A

T

T

G

G

C

T

G

T

Deyang

SC-2012-D1

-

-

C

T

G

T

T

-

-

-

C

-

A

G

T

T

A

T

T

G

G

C

T

G

T

SC-2012-D2

-

-

C

T

G

T

T

-

-

-

C

-

G

-

T

T

A

T

T

G

G

C

T

G

T

Suining

SC-2012-G

-

-

C

T

G

T

T

C

G

C

C

-

A

G

T

T

A

T

T

G

G

C

T

G

T

Zigong

SC-2012-J

T

C

C

T

-

T

T

-

G

-

A

T

G

-

T

T

A

-

T

G

G

C

T

G

T

Luzhou

SC-2012-K

T

C

C

T

-

T

T

-

G

-

C

T

G

-

T

T

A

T

T

G

G

C

T

G

T

Yibin

SC-2012-H1

-

-

C

T

G

T

T

-

-

C

A

T

A

T

T

T

A

-

T

G

G

C

T

G

T

SC-2012-H2

-

-

C

T

G

T

T

C

G

C

A

T

A

T

T

T

A

T

T

G

G

C

T

G

T

Ya’an

SC-2012-L1

T

C

C

T

G

T

T

-

-

C

A

T

G

-

T

T

A

T

T

G

G

C

T

G

T

SC-2012-L2

T

C

C

T

G

T

T

-

-

C

A

T

G

G

T

T

A

T

T

G

G

C

T

G

T

Leshan

SC-2013-I1

-

-

C

T

G

T

T

C

G

C

A

T

A

T

T

T

A

-

T

G

G

C

T

G

T

SC-2013-I2

-

-

C

T

G

T

T

-

G

C

A

T

A

T

T

T

A

-

T

G

G

C

T

G

T

Korea

GU181244

A

T

T

A

A

C

C

A

A

T

T

A

T

A

C

C

G

C

C

T

A

T

A

A

A