Figure 4
From: A cost effective real-time PCR for the detection of adenovirus from viral swabs
Human adenovirus fiber knob gene alignment. Compared to the prototypic type 14p (De Wit) sequence, a 6-bp deletion is clearly visible in all HAdV type 14p1 sequences. Black arrows demarcate the K250-E251 deletion. The query sequence from this study aligns with the HAdV type 14p1 sequences and also contains the 6-pb deletion. GenBank numbers are as follows: Ireland 2009 [Dublin/2009 (HQ163915.1/GI:307147785)]; USA 2007 [Portland/2971/2007 (FJ841909.1 GI:268588942)]; Canada 2001a [Canada/RV1368/2011 (JQ815084.1 GI:395135725)]; Canada 2001b [Canada/RV1360/2011 (JQ815083.1 GI:395135723)]; Canada 2011c [Canada/RV1370/2011 (JQ815085.1 GI:395135727)]; Netherlands 1974 [Netherlands/16845/1974 (FJ841910.1 GI:268588944)]; de Wit strain ATCC VR-1091 (AY803294.1 GI:57115621).