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Table 4 Estimates of selection pressures acting on the codons of five genome regions of isolates of ASGV using FUBAR and FEL methods in Datamonkey

From: Evolution and biogeography of apple stem grooving virus

Regions

Number of sites

Codons under PSa (FUBAR)

Number of NSb (FUBAR)

Codons under PS (FEL)

Number of NS (FEL)

1

515

0

487

0

466

2

57

38c, 44

19

38, 44

19

3

1011

0

977

0

924

4a

286

204d

5

189d

5

4b

320

296, 304, 307, 308, 314

266

296, 302, 304, 307, 308, 314

257

5

237

27, 94, 98, 103

137

27, 94, 98, 117, 137

125

  1. aPS: Positive selection, bNS: Negative selection, ccodons identified by both FUBAR and FEL, d Number of sites under positive selection