Virology Journal

Table 2 Genetic diversity of 66 non-recombinant ASGV isolates in different regions of the genome

From: Evolution and biogeography of apple stem grooving virus

Regions^a	Length (nt)	ϴ^b	π	d_N	d_S	d_N/d_S	Tajima’s D
1	1545	0.494	0.171	0.041	0.636	0.065	0.070^ns
2	171	0.729	0.464	0.397	0.728	0.546	-0.257^ns
3	3033	0.499	0.181	0.039	0.702	0.056	0.177^ns
4a	855	0.454	0.144	0.169	0.054	3.117	0.205^ns
4b (over-lapping − 2)	960	0.435	0.133	0.021	0.504	0.042	0.106^ns
5	711	0.354	0.079	0.018	0.288	0.062	-0.593^ns

^a ASGV genomic regions analyzed: 1, the methyltransferase domain of the RNA-dependent RNA polymerase (RdRP); 2, located within the RdRP; 3, the P-pro, Hel and RdRP domains of ORF1; 4, located within the movement protein (MP) and 5; the coat protein region.
^b Proportion of segregating sites.

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ISSN: 1743-422X

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