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Table 6 Wild Type, Synonymous, and Nonsynonymous Codons per High Entropy Position (exceeding 0.1) on SARS-CoV-2 Spike

From: Analysis of 3.5 million SARS-CoV-2 sequences reveals unique mutational trends with consistent nucleotide and codon frequencies

SARS-CoV-2 delta

SARS-CoV-2 omicron

Position

WT codons

Synonymous codons

Nonsynonymous codons

Position

WT codons

Synonymous codons

Nonsynonymous codons

4

1,387,485

51

20,255

10

1,071,175

124,747

40

94

792,111

88

615,597

18

593,973

16

601,961

111

1,374,841

642

32,333

23

598,455

29

246,641

141

220,153

4

1,186,783

52

1,111,530

84,384

36

144

1,368,800

1854

36,124

66

606,936

39

588,890

155

21,903

191

150

67

553,440

542,664

3785

156

21,572

94

123

94

605,813

18

589,846

157

21,145

6

1,378,971

141

8899

194

1,140,676

221

1,253,151

46

154,877

211

609,770

234

540,403

288

1,389,455

57

18,564

212

597,049

41

598,862

409

1,383,411

24,569

101

338

11,212

0

1,184,745

412

1,386,531

21,428

122

345

823,247

27

372,129

476

1,393,255

8165

6652

370

13,942

5

1,182,006

573

1,367,400

38,500

2180

375

598,382

26

597,529

612

1,388,221

56

19,803

404

600,131

15

595,804

855

1,371,204

35,927

944

407

603,498

26

592,427

881

1,300,777

107,237

61

409

1,065,180

130,764

10

949

30,891

1

1,377,121

416

50,767

0

1,145,194

1103

1,389,498

118

18,462

439

60,885

1

1,135,053

1121

1,383,517

23,035

1529

445

636,351

1

559,592

1258

1,362,896

39,980

5204

451

1,048,422

274

147,250

1263

1,371,670

2790

33,609

483

14,073

0

1,181,087

    

485

1,146,988

27

48,153

    

492

61,473

3

1,133,675

    

495

610,353

29

584,748

    

504

15,157

3

1,179,979

    

546

607,050

37

588,874

    

700

1,157,571

58

38,333

    

703

1,100,568

34

95,357

    

763

21,025

40

1,174,898

    

855

605,800

1207

588,952

    

980

607,167

10

588,784