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Table 2 HAstV genotypes detected in 2018–2019

From: Diversity of human astroviruses in Germany 2018 and 2019

Collection period

HAstV 1

HAstV 3

HAstV 4

HAstV 5

HAstV 8

HAstV classic*

MLB1

MLB2

VA1

VA2

total

2018

4

2

2

0

0

3

5

1

0

0

17

2019

3

3

0

1

0

1

3

1

1

1

14

No collection date available

1

0

1

0

1

0

2

1

3

0

9

Total

8 (20%)

5 (12.5%)

3 (7.5%)

1 (2.5%)

1 (2.5%)

4 (10%)

10 (25%)

3 (7.5%)

4 (10%)

1 (2.5%)

40

  1. *A sample was defined as HAstV classic if only a fragment of PCR screening assay could be sequenced (~ 170 bp), the short sequence cannot discriminate HAstV classic genotypes. From nine positive HAstV samples the collection date was not available