Table 2 Information of 23 recombinant lineages of CVB3s based on P2 and P3 non-structural region sequences
From: Whole-genome analysis of coxsackievirus B3 reflects its genetic diversity in China and worldwide
Lineage | Cluster | Sequence number | Nucleotide mean distances (%) | Isolated countries/regions | Isolated year |
|---|---|---|---|---|---|
A | A | 10 | 0.46 | USA, China | 1949–2014 |
B | B | 1 | NA | USA | 1956 |
C | E | 1 | NA | Romania | 1989 |
D | E | 1 | NA | France | 1993 |
E | E | 1 | NA | Romania | 1995 |
F | C | 1 | NA | Uzbekistan | 1999 |
G | D | 1 | NA | China | 2001 |
H | E | 1 | NA | Moldova | 2002 |
I | E | 1 | NA | USA | 2005 |
J | E | 11 | 4.14 | Australia, the UK, USA, China | 2006–2020 |
K | D | 9 | 4.24 | China | 2006–2013 |
L | D | 10 | 2.80 | China, Thailand | 2008–2012 |
M | D | 1 | NA | China | 2009 |
N | E | 1 | NA | Australia | 2009 |
O1 | C | 11 | 1.39 | India | 2009 |
O2 | C | 1 | NA | India | 2009 |
P | E | 1 | NA | Thailand | 2010 |
Q | E | 1 | NA | Denmark | 2010 |
R | D | 8 | 2.65 | China | 2012–2016 |
S1 | D | 2 | 0.10 | China | 2016 |
S2 | D | 2 | 0.43 | China | 2016 |
T | D | 2 | 1.84 | China | 2016 |
U | D | 6 | 2.30 | China | 2016–2017 |