Fig. 3
From: Whole-genome analysis of coxsackievirus B3 reflects its genetic diversity in China and worldwide
Neighbor-joining phylogenetic trees of 84 global CVB3 constructed based on the coding regions. A P1 capsid region. B P2 non-structural region. C P3 non-structural region. The lineages are differentiated by distinct colors. D The diverse recombinant lineages were certified based on ORF1 sequences using bootscanning analyses. The prototype Nancy of CVB3 from lineage A was labelled red as reference. E Inter-lineage pairwise similarity comparison of main lineages circulating in the mainland China based on ORF1 sequences using sliding window nucleotide similarity analysis with a 200-nt window moving in 20-nt steps