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Table 3 Sequence analysis of Cap genes of PCV3 strains

From: Molecular detection and phylogenetic analysis of porcine circovirus type 3 in Tibetan pigs on the Qinghai-Tibet Plateau of China

Selected strains (GenBank accession no.)

Cap gene

Complete genome

Nucleotide

Amino acids

nucleotide

Identity of the PCV3 strains identified in our study

95.84–99.18%

87.86–99.52%

94.64–99.82%

Compared with Chinese PCV3 reference strainsa

97.51–98.75%

91.52–97.10%

93.86–97.55%

Compared with PCV3 reference strains from other countriesb

96.34–98.91%

91.52–97.10%

93.12–98.65%

  1. aThe GenBank accession no. of Chinese PCV3 reference strains: MG897474, MG253681, MG372484, MF769805, MK580467, MG372491, MK746099, MF589106, MK095621, MH277112, MH107161, MF769811, MK284236, and MG897485
  2. bThe GenBank accession no. of PCV3 reference strains from other countries: MG679916, MF805721, KY996343, MF079254, MF805722, MF805720, and KX778720