Table 3 Differential amino acid residues of the CDS between CH-HB2021 (MZ542765) strain and other isolates
GenBank no./strain | Gene | Differential amino acid sites | Replacement rate | Total |
|---|---|---|---|---|
KY652092/APPV_GX-CH 2016 | Npro | G105S, L145M, R162G | 3/180 (1.67%) | 36/3635 (0.99%) |
C | V75I, T107I, Y119H | 3/111 (2.70%) | ||
Erns | A105G, Y119H, N159S, A169V | 4/210 (1.90%) | ||
E1 | A2V | 1/199 (0.50%) | ||
E2 | E6Q, K18R, G35R, N47K, G52N, I67S, R118G | 7/241 (2.90%) | ||
NS2 | E127K | 1/314 (0.32%) | ||
NS4B | D14T, A16V, V30A, S72F | 4/339 (1.18%) | ||
NS5A | R52Q, V114I, T115I, D407N, T410M, A433T | 6/472 (1.27%) | ||
NS5B | S5N, D85N, I142V, S189N, I445M, P497L, T728I | 7/751 (0.93%) | ||
MW401769/CH-HB2020 | Erns | A103G | 1/210 (0.48%) | 6/3635 (0.17%) |
NS2 | E127K | 1/314 (0.32%) | ||
NS4B | D14F, A20V, S72F | 3/339 (0.88%) | ||
NS5B | P497L | 1/751 (0.13%) |