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Table 1 Number of OTUs per group and estimate of sequence diversity and richness

From: Analysis of the intestinal microbial community altered during rotavirus infection in suckling mice

Sample name

OTUs

Reads

observed_species

Shannon

Simpson

Goods_coverage

RV-1

35

62,257

35

2.066

0.706

0.999

RV-2

25

60,752

23

2.476

0.768

0.999

RV-3

27

64,632

26

2.305

0.731

0.999

RV-4

23

60,228

22

1.741

0.586

0.999

RV-5

28

60,919

28

2.081

0.591

0.999

RV-6

25

58,502

24

1.719

0.549

0.999

RV-7

39

61,331

38

2.467

0.765

0.999

RV-8

32

61,631

32

2.575

0.781

0.999

RV-9

37

55,827

37

2.388

0.721

0.999

RV-10

32

58,004

31

2.368

0.748

0.999

NC-1

27

55,601

26

1.619

0.552

0.999

NC-2

24

58,633

22

2.404

0.752

0.999

NC-3

47

56,388

46

2.632

0.773

0.999

NC-4

44

60,228

43

2.021

0.669

0.999

NC-5

69

60,919

67

2.473

0.732

0.999

NC-6

46

57,250

45

1.765

0.536

0.999

NC-7

44

57,272

44

1.590

0.512

0.999

NC-8

83

56,172

83

2.770

0.667

0.999

NC-9

42

60,303

42

2.318

0.734

0.999

NC-10

28

58,004

28

2.084

0.673

0.999