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Table 5 The up-regulated pathways focused in the discussion section

From: Transcriptional responses of Daphnis nerii larval midgut to oral infection by Daphnis nerii cypovirus-23

id Term pValue Enrichment_score Gene_id BaseMean_control_mock BaseMean_case_DnCPV FoldChange pValue qValue Regulation NR annotation KEGG gene name
ko00564 Glycerophospholipid metabolism 0.00046 3.794540796 TRINITY_DN14020_c0_g1_i1_6 1066.209777 3311.867512 3.106206287 0.027085 0.610813421 Up phosphatidate phosphatase LPIN2 isoform X2 [Trichoplusia ni] LPIN
     TRINITY_DN14343_c0_g2_i1_4 25.87214477 100.8782352 3.899106012 0.02501 0.591372647 Up hypothetical protein B5V51_748 [Heliothis virescens] NTE, NRE
     TRINITY_DN14343_c2_g1_i1_5 1212.926019 3816.360113 3.146407986 0.018214 0.514696311 Up phosphatidate phosphatase LPIN3 isoform X1 [Bombyx mori] LPIN
     TRINITY_DN2180_c0_g1_i1_3 5.852454693 49.91148246 8.528298822 0.005837 0.276535057 Up group XV phospholipase A2-like [Trichoplusia ni] LYPLA3
     TRINITY_DN10250_c0_g1_i1_1 73.45139125 221.6966763 3.018277429 0.037654 0.703084732 Up group XV phospholipase A2-like [Trichoplusia ni] LYPLA3
     TRINITY_DN11518_c6_g1_i1_2 52.98336083 709.749683 13.39570899 0.008188 0.337015221 Up Phosphatidylserine decarboxylase [Operophtera brumata] psd, PISD
     TRINITY_DN12265_c0_g2_i1_2 21.24218102 111.7071749 5.258743197 0.006687 0.296214335 Up Neuropathy target esterase sws [Papilio xuthus] NTE, NRE
ko00260 Glycine, serine and threonine metabolism 0.00232 4.238058552 TRINITY_DN9933_c0_g1_i2_6 782.5009178 4185.641092 5.349055824 0.025238 0.593696583 Up phosphoserine phosphatase isoform X3 [Trichoplusia ni] serB, PSPH
     TRINITY_DN7804_c0_g1_i1_2 11.1084935 91.01956837 8.193691462 0.032267 0.660850357 Up glucose dehydrogenase [FAD, quinone] [Bombyx mori] betA, CHDH
     TRINITY_DN12220_c1_g1_i9_4 107.649078 517.8794976 4.8108122 0.00313 0.19793455 Up PREDICTED: phosphoserine phosphatase [Amyelois transitella] serB, PSPH
     TRINITY_DN10934_c0_g2_i2_1 2279.078944 10,414.52625 4.569620669 0.002617 0.17866588 Up phosphoserine phosphatase isoform X1 [Bombyx mori] serB, PSPH
ko00982 Drug metabolism—cytochrome P450 0.0002 4.29382248 TRINITY_DN11538_c1_g1_i3_2 228.6892992 2097.050761 9.169868326 0.023489 0.577337157 Up hypothetical protein B5V51_11710 [Heliothis virescens] UGT
     TRINITY_DN14215_c0_g5_i7_5 127.0025656 13,180.97268 103.7850898 0.020886 0.5511394 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
     TRINITY_DN7938_c0_g2_i1_2 3.93470221 637.5929402 162.0435058 6.29 E−05 0.013882511 Up PREDICTED: uncharacterized protein LOC106102769 [Papilio polytes] GST, gst
     TRINITY_DN13727_c0_g2_i1_5 185.9951388 4205.660038 22.61166644 0.002663 0.180041496 Up UDP-glycosyltransferase UGT340C2 [Bombyx mori] UGT
     TRINITY_DN13616_c0_g3_i6_5 25.95433532 8843.383538 340.7285692 0.014481 0.449089688 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
     TRINITY_DN11622_c2_g4_i1_2 0 23.44067936 Inf 0.026206 0.601380717 Up UDP-glucuronosyltransferase 2B15-like isoform X1 [Helicoverpa armigera] UGT
     TRINITY_DN11402_c0_g2_i13_2 663.9094166 6959.047076 10.48192254 0.000742 0.080554531 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
ko00980 Metabolism of xenobiotics by cytochrome P450 0.00043 3.839182453 TRINITY_DN11538_c1_g1_i3_2 228.6892992 2097.050761 9.169868326 0.023489 0.577337157 Up hypothetical protein B5V51_11710 [Heliothis virescens] UGT
     TRINITY_DN14215_c0_g5_i7_5 127.0025656 13,180.97268 103.7850898 0.020886 0.5511394 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
     TRINITY_DN7938_c0_g2_i1_2 3.93470221 637.5929402 162.0435058 6.29 E− E−05 0.013882511 Up PREDICTED: uncharacterized protein LOC106102769 [Papilio polytes] GST, gst
     TRINITY_DN13727_c0_g2_i1_5 185.9951388 4205.660038 22.61166644 0.002663 0.180041496 Up UDP-glycosyltransferase UGT340C2 [Bombyx mori] UGT
     TRINITY_DN13616_c0_g3_i6_5 25.95433532 8843.383538 340.7285692 0.014481 0.449089688 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
     TRINITY_DN11622_c2_g4_i1_2 0 23.44067936 Inf 0.026206 0.601380717 Up UDP-glucuronosyltransferase 2B15-like isoform X1 [Helicoverpa armigera] UGT
     TRINITY_DN11402_c0_g2_i13_2 663.9094166 6959.047076 10.48192254 0.000742 0.080554531 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
ko00983 Drug metabolism—other enzymes 0.00101 3.107909605 TRINITY_DN11538_c1_g1_i3_2 228.6892992 2097.050761 9.169868326 0.023489 0.577337157 Up hypothetical protein B5V51_11710 [Heliothis virescens] UGT
     TRINITY_DN14215_c0_g5_i7_5 127.0025656 13,180.97268 103.7850898 0.020886 0.5511394 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
     TRINITY_DN7938_c0_g2_i1_2 3.93470221 637.5929402 162.0435058 6.29 E−05 0.013882511 Up PREDICTED: uncharacterized protein LOC106102769 [Papilio polytes] GST, gst
     TRINITY_DN13727_c0_g2_i1_5 185.9951388 4205.660038 22.61166644 0.002663 0.180041496 Up UDP-glycosyltransferase UGT340C2 [Bombyx mori] UGT
     TRINITY_DN11728_c0_g1_i4_2 1306.667581 6467.759766 4.949812684 0.001549 0.128973078 Up uridine phosphorylase 1 isoform X2 [Bombyx mori] udp, UPP
     TRINITY_DN13616_c0_g3_i6_5 25.95433532 8843.383538 340.7285692 0.014481 0.449089688 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
     TRINITY_DN11622_c2_g4_i1_2 0 23.44067936 Inf 0.026206 0.601380717 Up UDP-glucuronosyltransferase 2B15-like isoform X1 [Helicoverpa armigera] UGT
     TRINITY_DN11402_c0_g2_i13_2 663.9094166 6959.047076 10.48192254 0.000742 0.080554531 Up UDP-glucuronosyltransferase 1-7C-like [Trichoplusia ni] UGT
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Virology Journal

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