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Table 4 The down-regulated pathways focused in the discussion section

From: Transcriptional responses of Daphnis nerii larval midgut to oral infection by Daphnis nerii cypovirus-23

id Term pValue Enrichment_score gene_id BaseMean_control_mock BaseMean_case_DnCPV FoldChange pValue qValue Regulation NR annotation KEGG gene name
ko04974 Protein digestion and absorption 1.33E−17 6.845688889 TRINITY_DN12884_c1_g5_i1_1 2843.901036 282.1111777 0.099198662 1.72 E−06 0.0007668 Down LOW QUALITY PROTEIN: carboxypeptidase B [Bombyx mori] CPA2
     TRINITY_DN13745_c3_g2_i2_4 37,228.13358 6283.238748 0.168776625 0.04653249 0.7667028 Down putative chymotrypsin, partial [Samia ricini] CELA2
     TRINITY_DN13546_c1_g2_i2_1 33,763.67895 179.8629852 0.005327115 1.26 E−10 2.06 E−07 Down RecName: Full = Trypsin, alkaline C; Flags: Precursor PRSS1_2_3
     TRINITY_DN11633_c0_g1_i2_3 576.0371804 28.38155477 0.049270352 1.62 E−08 1.12 E−05 Down trypsin, alkaline C-like [Spodoptera litura] PRSS1_2_3
     TRINITY_DN13619_c0_g2_i1_3 701.0350489 199.5322761 0.28462525 0.00871419 0.3479086 Down sodium/potassium-transporting ATPase subunit alpha isoform X6 [Bombyx mori] ATP1A
     TRINITY_DN13597_c0_g2_i2_4 683.1424229 36.96948382 0.054116803 0.03730582 0.7023823 Down serine protease 62 [Mamestra configurata] PRSS1_2_3
     TRINITY_DN10836_c0_g7_i1_6 407.2114124 52.04490715 0.127808076 0.00142694 0.1232753 Down trypsin, partial [Manduca sexta] PRSS1_2_3
     TRINITY_DN7116_c0_g1_i1_5 140.0397486 41.73985284 0.298057182 0.02906 0.6296715 Down Prolylcarboxypeptidase [Danaus plexippus plexippus] PRCP
     TRINITY_DN5681_c0_g1_i1_6 1202.562374 41.63057875 0.034618228 0.00013096 0.0240473 Down chymotrypsinogen-like protein 3 [Manduca sexta] PRSS1_2_3
     TRINITY_DN10836_c0_g5_i1_6 3539.814633 11.52410727 0.003255568 0.00393418 0.2234223 Down trypsin, alkaline C [Bombyx mori] PRSS1_2_3
     TRINITY_DN14237_c1_g1_i3_3 2139.270665 126.8457966 0.059293945 0.00362815 0.2142243 Down hypothetical protein B5V51_4161 [Heliothis virescens] PRSS1_2_3
     TRINITY_DN18044_c0_g1_i1_4 61.20950346 0 0 0.00262208 0.1786659 Down RecName: Full = Trypsin, alkaline C; Flags: Precursor PRSS1_2_3
     TRINITY_DN13619_c0_g3_i1_3 1098.504638 384.681457 0.350186466 0.02344348 0.5771173 Down Sodium/potassium-transporting ATPase subunit alpha [Papilio xuthus] ATP1A
     TRINITY_DN12770_c1_g2_i2_6 33,988.65545 2472.057397 0.072731838 0.03984473 0.7217322 Down serine protease 62 [Mamestra configurata] PRSS1_2_3
     TRINITY_DN14161_c2_g2_i3_3 150,880.9838 10,699.40148 0.070912856 0.027439 0.6151748 Down trypsin, alkaline C-like [Spodoptera litura] PRSS1_2_3
     TRINITY_DN12929_c2_g1_i1_6 9158.048497 41.0899202 0.004486755 0.00143302 0.1232753 Down trypsin [Manduca sexta] PRSS1_2_3
     TRINITY_DN10836_c0_g1_i4_6 157,887.1736 53,448.64932 0.338524328 0.02226533 0.5641697 Down trypsin, alkaline C-like [Bombyx mori] PRSS1_2_3
     TRINITY_DN12646_c0_g1_i3_6 18,799.76899 343.0033323 0.018245082 0.00558226 0.271197 Down trypsin, alkaline C-like [Spodoptera litura] PRSS1_2_3
     TRINITY_DN3826_c0_g1_i1_3 4708.243184 116.815754 0.024810901 0.00083317 0.0853474 Down serine protease 5 [Mamestra configurata] PRSS1_2_3
     TRINITY_DN12903_c0_g1_i1_6 588.272948 19.69837276 0.03348509 7.39 E−10 8.85 E−07 Down silk gland derived serine protease [Bombyx mori] PRSS1_2_3
     TRINITY_DN14269_c4_g1_i5_4 15,015.14212 207.7199418 0.013834031 0.00010037 0.019782 Down trypsin [Manduca sexta] PRSS1_2_3
     TRINITY_DN8384_c0_g2_i8_4 4501.305649 35.57861617 0.007904066 0.00033725 0.0475214 Down chymotrypsinogen-like protein 3 [Manduca sexta] PRSS1_2_3
     TRINITY_DN17232_c0_g1_i1_5 229.0935699 80.06529495 0.349487308 0.03584292 0.6919927 Down proton-coupled amino acid transporter-like protein CG1139 [Trichoplusia ni] SLC36A, PAT
     TRINITY_DN8969_c0_g1_i1_6 1070.195299 24.35172941 0.022754472 0.00153816 0.1284174 Down carboxypeptidase B [Bombyx mori] CPA2
     TRINITY_DN12498_c2_g2_i1_5 3577.880426 0 0 0.00308839 0.197654 Down trypsin CFT-1-like [Trichoplusia ni] PRSS1_2_3
     TRINITY_DN9363_c0_g1_i1_5 2166.100895 67.76280065 0.031283308 7.81 E−11 1.52 E−07 Down trypsin precursor AiD2, partial [Agrotis ipsilon] PRSS1_2_3
     TRINITY_DN7771_c0_g1_i1_1 166.8439433 24.32627007 0.145802536 0.01850363 0.5173478 Down hypothetical protein B5V51_4161 [Heliothis virescens] PRSS1_2_3
     TRINITY_DN1220_c0_g1_i1_5 14,636.6041 1623.956772 0.110951745 6.30 E−06 0.0020452 Down trypsin, alkaline C-like [Spodoptera litura] PRSS1_2_3
ko04977 Vitamin digestion and absorption 8.59 E−05 4.753950617 TRINITY_DN8071_c0_g1_i2_5 159.1367963 7.893169411 0.049599901 2.35 E−05 0.0062453 Down proton-coupled folate transporter isoform X2 [Bombyx mori] SLC46A1
     TRINITY_DN12381_c0_g2_i1_6 15,115.15447 69.82405532 0.004619473 1.51 E−05 0.0042801 Down pancreatic triacylglycerol lipas E−like [Spodoptera litura] PNLIP, PL
     TRINITY_DN9781_c0_g1_i1_3 75.2460337 20.63729453 0.274264217 0.03100164 0.6531949 Down scavenger receptor class B type 1 like protein 12 [Bombyx mori] SCARB1
     TRINITY_DN11521_c0_g1_i2_4 1196.401288 280.0407483 0.234069247 0.00250876 0.1751687 Down solute carrier family 52, riboflavin transporter, member 3-B isoform X3 [Trichoplusia ni] SLC52A3, RFT2
     TRINITY_DN14080_c0_g1_i4_5 13,236.92182 908.4409062 0.068629317 0.03090689 0.6516395 Down pancreatic triacylglycerol lipase [Bombyx mori] PNLIP, PL
     TRINITY_DN17108_c0_g1_i1_5 19.89691746 1.317177118 0.066200059 0.0121168 0.4110339 Down hypothetical protein B5V51_177 [Heliothis virescens] SLC46A1
     TRINITY_DN14140_c0_g1_i1_6 6399.436654 1095.005085 0.171109606 0.00016917 0.0286312 Down sensory neuron membrane protein 2 [Bombyx mori] SCARB1
ko04624 Toll and Imd signaling pathway 0.00016 3.943369176 TRINITY_DN13195_c0_g1_i3_3 48,818.06612 740.1059156 0.015160492 2.79 E−06 0.0010722 Down peptidoglycan recognition protein 2 [Manduca sexta] PGRP
     TRINITY_DN1052_c0_g1_i2_5 74.58752535 0 0 0.02832612 0.6208957 Down Bacteriophage T7 lysozym E−like protein 1 (BTL-LP1) [Bombyx mori] PGRP
     TRINITY_DN10280_c0_g1_i1_3 1415.480197 536.8363029 0.379260907 0.04150037 0.7315422 Down caspas E−6 [Manduca sexta] CASP8
     TRINITY_DN14006_c2_g1_i2_4 16,714.28346 318.7737419 0.019071936 3.82 E−10 5.17 E−07 Down peptidoglycan recognition protein 2 [Manduca sexta] PGRP
ko00830 Retinol metabolism 0.000409 3.492698413 TRINITY_DN14190_c1_g2_i2_4 4018.349256 720.63212 0.179335362 0.04158394 0.7316189 Down UDP-glucosyltransferase isoform X1 [Bombyx mori] UGT
     TRINITY_DN12319_c0_g2_i1_4 4465.699274 170.972127 0.038285634 2.79 E−06 0.0010722 Down UDP-glycosyltransferase UGT340C2 [Bombyx mori] UGT
     TRINITY_DN12896_c1_g2_i3_3 4251.17249 1508.008769 0.35472773 0.02274633 0.5685456 Down PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Papilio machaon] DHRS4
     TRINITY_DN13518_c1_g1_i6_6 745.6825793 119.2237632 0.159885408 0.0001628 0.0278557 Down UDP-glycosyltransferase UGT340C1 precursor [Bombyx mori] UGT
     TRINITY_DN14445_c0_g1_i1_3 151.0781746 54.27468401 0.359249006 0.04671659 0.7685163 Down hypothetical protein B5X24_HaOG201493 [Helicoverpa armigera] RDH12
     TRINITY_DN9738_c0_g1_i1_6 438.41149 83.17535239 0.189719828 0.04256225 0.7412925 Down uncharacterized protein LOC112052352 [Bicyclus anynana] UGT
     TRINITY_DN8673_c0_g1_i3_3 839.7824168 167.2848772 0.199200262 0.00073535 0.0803495 Down PREDICTED: UDP-glucuronosyltransferase 2B19-like isoform X6 [Amyelois transitella] UGT
     TRINITY_DN17220_c0_g1_i1_4 6379.593263 3.929259199 0.000615911 0.00570705 0.2744919 Down UDP-glycosyltransferase UGT340C1 precursor [Bombyx mori] UGT